RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 RDXP35241 583 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 CLDN10P78369 228 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 ZNF33AQ06730 810 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 PIP4P1Q86T03 277 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 CHPFQ8IZ52 775 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 GTPBP2Q9BX10 602 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 DNAJC17Q9NVM6 304 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 WDR35Q9P2L0 1181 aa17.2■□□□□ 0.34
BRD9-201ENST00000466684 LSM7Q9UK45 103 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 RALYQ9UKM9 306 aaKnown RBP17.2■□□□□ 0.34
BRD9-201ENST00000466684 MYO18AQ92614 2054 aaKnown RBP17.19■□□□□ 0.34
BRD9-201ENST00000466684 PI4KAP42356 2102 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 A0A1W2PQF6 199 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
BRD9-201ENST00000466684 NEDD8-MDP1E9PL57 170 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 POLR2DO15514 142 aaKnown RBP17.19■□□□□ 0.34
BRD9-201ENST00000466684 CACNG3O60359 315 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 OPHN1O60890 802 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
BRD9-201ENST00000466684 IGF2RP11717 2491 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 WASP42768 502 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 SIM1P81133 766 aaPredicted RBP17.19■□□□□ 0.34
BRD9-201ENST00000466684 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 KIAA1211LQ6NV74 962 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 DEFB119Q8N690 84 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 SLC2A14Q8TDB8 520 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 WBP2Q969T9 261 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 SMOQ99835 787 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 BBS2Q9BXC9 721 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 SDCBP2Q9H190 292 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 CAPN10Q9HC96 672 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 CSNK1G1Q9HCP0 422 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■■■ 156.5
BRD9-201ENST00000466684 FRYQ5TBA9 3013 aa17.19■□□□□ 0.34
BRD9-201ENST00000466684 CEP192Q8TEP8 1941 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 IGHV1OR15-9A0A0B4J2B8 117 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 H0Y626 953 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 TRIM16O95361 564 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 RPN1P04843 607 aaKnown RBP17.18■□□□□ 0.34
BRD9-201ENST00000466684 CCDC130P13994 396 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 TYRP14679 529 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 CASP1P29466 404 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 ATP5C1P36542 298 aaKnown RBP17.18■□□□□ 0.34
BRD9-201ENST00000466684 MAP3K7CLP57077 242 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 HNRNPDQ14103 355 aaKnown RBP17.18■□□□□ 0.34
BRD9-201ENST00000466684 EGFLAMQ63HQ2 1017 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 UNC93AQ86WB7 457 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 ZMIZ2Q8NF64 920 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 IPO4Q8TEX9 1081 aaKnown RBP17.18■□□□□ 0.34
BRD9-201ENST00000466684 TAF4BQ92750 862 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 KLF16Q9BXK1 252 aaPredicted RBP17.18■□□□□ 0.34
BRD9-201ENST00000466684 CYLDQ9NQC7 956 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 MARK1Q9P0L2 795 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 HCN2Q9UL51 889 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 MSRB2Q9Y3D2 182 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 GON4LQ3T8J9 2241 aa17.18■□□□□ 0.34
BRD9-201ENST00000466684 SPAARA0A1B0GVQ0 90 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 A0A1W2PQD8 194 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 ARHGAP33O14559 1287 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 TRIM24O15164 1050 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 HYAL3O43820 417 aaPredicted RBP17.17■□□□□ 0.34
BRD9-201ENST00000466684 BEST1O76090 585 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 VNN1O95497 513 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 SYPP08247 313 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 AFMP43652 599 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 NDST1P52848 882 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 TPGS1Q6ZTW0 290 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 MINDY1Q8N5J2 469 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 ZCCHC14Q8WYQ9 949 aaKnown RBP17.17■□□□□ 0.34
BRD9-201ENST00000466684 GABRG3Q99928 467 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 FSCN3Q9NQT6 498 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 CYP8B1Q9UNU6 501 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 SCML2Q9UQR0 700 aa17.17■□□□□ 0.34
BRD9-201ENST00000466684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
BRD9-201ENST00000466684 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
BRD9-201ENST00000466684 GREM1O60565 184 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 TBX18O95935 607 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 FAM200BP0CF97 657 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 NDUFV2P19404 249 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 PGFP49763 221 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 CUL4BQ13620 913 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 SLC9A9Q8IVB4 645 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 TRIML1Q8N9V2 468 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 TMEM174Q8WUU8 243 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 HSPA12BQ96MM6 686 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 ACOX2Q99424 681 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 FAM124BQ9H5Z6 455 aaPredicted RBP17.16■□□□□ 0.34
BRD9-201ENST00000466684 CD248Q9HCU0 757 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 FAM49BQ9NUQ9 324 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 SUSD2Q9UGT4 822 aa17.16■□□□□ 0.34
BRD9-201ENST00000466684 PCNX2A6NKB5 2137 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms