RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 BYSLQ13895 437 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 C1orf220Q5T0J3 134 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 C10orf76Q5T2E6 689 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 GRAMD4Q6IC98 578 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 TPGS1Q6ZTW0 290 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 RSRC2Q7L4I2 434 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 C12orf40Q86WS4 652 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 ZMIZ2Q8NF64 920 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 ZC3H10Q96K80 434 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 CNOT6LQ96LI5 555 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 TWNKQ96RR1 684 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 CDK5RAP1Q96SZ6 601 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 BBS2Q9BXC9 721 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 DNAJC17Q9NVM6 304 aaKnown RBP18.47■□□□□ 0.55
COL7A1-206ENST00000466591 RAB20Q9NX57 234 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 IL37Q9NZH6 218 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 DNMT3LQ9UJW3 386 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 A0A1W2PQH9 124 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 TCRBV21S2A2A0A5A6 115 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 CILPO75339 1184 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 TULP3O75386 442 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 CAVIN2O95810 425 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 ZDHHC11BP0C7U3 371 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 DHPSP49366 369 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-206ENST00000466591 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.55
COL7A1-206ENST00000466591 NUCB2P80303 420 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 RNF43Q68DV7 783 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 GPRIN1Q7Z2K8 1008 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 CYP2U1Q7Z449 544 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 MIB1Q86YT6 1006 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 ZNF513Q8N8E2 541 aaPredicted RBP18.46■□□□□ 0.55
COL7A1-206ENST00000466591 HMGB4Q8WW32 186 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 ZFRQ96KR1 1074 aaKnown RBP18.46■□□□□ 0.55
COL7A1-206ENST00000466591 GTPBP4Q9BZE4 634 aaKnown RBP18.46■□□□□ 0.55
COL7A1-206ENST00000466591 SMOC1Q9H4F8 434 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 PNPLA8Q9NP80 782 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 ZDHHC4Q9NPG8 344 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 WDR35Q9P2L0 1181 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 RASAL2Q9UJF2 1139 aa18.46■□□□□ 0.55
COL7A1-206ENST00000466591 MYO16Q9Y6X6 1858 aa18.46■□□□□ 0.54
COL7A1-206ENST00000466591 FAM92AA1XBS5 289 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 HOXC11O43248 304 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-206ENST00000466591 TBX18O95935 607 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 PLA2G4AP47712 749 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 ZNF658Q5TYW1 1059 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-206ENST00000466591 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 ARHGAP18Q8N392 663 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 IL17RCQ8NAC3 791 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 MDGA1Q8NFP4 955 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 BHMTQ93088 406 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 TMEM176AQ96HP8 235 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 DUSP16Q9BY84 665 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 DUSP15Q9H1R2 295 aaPredicted RBP18.45■□□□□ 0.54
COL7A1-206ENST00000466591 CISHQ9NSE2 258 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 NUDT5Q9UKK9 219 aa18.45■□□□□ 0.54
COL7A1-206ENST00000466591 FRYLO94915 3013 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 SGK1O00141 431 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 PRCPP42785 496 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 FKBP3Q00688 224 aaKnown RBP18.44■□□□□ 0.54
COL7A1-206ENST00000466591 GAB4Q2WGN9 574 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 PPP1R26Q5T8A7 1209 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-206ENST00000466591 EMC10Q5UCC4 262 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 HTR3DQ70Z44 454 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 LPCAT2Q7L5N7 544 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 CHPFQ8IZ52 775 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 GSDMAQ96QA5 445 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 EDEM2Q9BV94 578 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 CYLDQ9NQC7 956 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 HESX1Q9UBX0 185 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
COL7A1-206ENST00000466591 STRIP2Q9ULQ0 834 aa18.44■□□□□ 0.54
COL7A1-206ENST00000466591 WDR87Q6ZQQ6 2873 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 PSMA7O14818 248 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 KHNYNO15037 678 aaKnown RBP18.43■□□□□ 0.54
COL7A1-206ENST00000466591 MDM4O15151 490 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 SLC16A3O15427 465 aaKnown RBP18.43■□□□□ 0.54
COL7A1-206ENST00000466591 HMBSP08397 361 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 HOXB2P14652 356 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 TYRP14679 529 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 CD19P15391 556 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 EFEMP1Q12805 493 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 ZCWPW2Q504Y3 356 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 STPG1Q5TH74 334 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 TMEM92Q6UXU6 159 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 SFTPA1Q8IWL2 248 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 TERB1Q8NA31 727 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 KCNV2Q8TDN2 545 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 PIGKQ92643 395 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 FAXDC2Q96IV6 333 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 KLF16Q9BXK1 252 aaPredicted RBP18.43■□□□□ 0.54
COL7A1-206ENST00000466591 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL7A1-206ENST00000466591 ZNF510Q9Y2H8 683 aa18.43■□□□□ 0.54
COL7A1-206ENST00000466591 CEP250Q9BV73 2442 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 CYBBP04839 570 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 WASP42768 502 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 KIF11P52732 1056 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 LIMK1P53667 647 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 COG7P83436 770 aa18.42■□□□□ 0.54
COL7A1-206ENST00000466591 LRRC63Q05C16 580 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms