RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 YWHAGP61981 247 aaKnown RBP eCLIP27.22■■□□□ 1.95
SMC4-206ENST00000465903 UBXN2BQ14CS0 331 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 MEA1Q16626 185 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 FKBP15Q5T1M5 1219 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 KLHDC10Q6PID8 442 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 NELL2Q99435 816 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 MUC6Q6W4X9 2439 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 ATG2BQ96BY7 2078 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 PIK3R2O00459 728 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 MED7O43513 233 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 RAPGEF1Q13905 1077 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 ZSCAN23Q3MJ62 389 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 RALGPS2Q86X27 583 aaPredicted RBP27.21■■□□□ 1.95
SMC4-206ENST00000465903 DDX42Q86XP3 938 aaKnown RBP eCLIP27.21■■□□□ 1.95
SMC4-206ENST00000465903 MSANTD3Q96H12 275 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 ECT2Q9H8V3 914 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 CNGB3Q9NQW8 809 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 CYTH4Q9UIA0 394 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 HCN4Q9Y3Q4 1203 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 WDFY4Q6ZS81 3184 aa27.21■■□□□ 1.95
SMC4-206ENST00000465903 SCAMP3O14828 347 aaKnown RBP27.2■■□□□ 1.94
SMC4-206ENST00000465903 EPHB6O15197 1021 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 RALAP11233 206 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 DAOAP59103 153 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 PTK2Q05397 1052 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 SLC47A2Q86VL8 602 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 SIX6OS1Q8N1H7 587 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 ARHGAP18Q8N392 663 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 PRSS33Q8NF86 280 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 NACA2Q9H009 215 aa27.2■■□□□ 1.94
SMC4-206ENST00000465903 NDRG2Q9UN36 371 aaKnown RBP27.2■■□□□ 1.94
SMC4-206ENST00000465903 MRPS17Q9Y2R5 130 aaKnown RBP27.2■■□□□ 1.94
SMC4-206ENST00000465903 E2F8A0AVK6 867 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 YJEFN3A6XGL0 299 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 E7ENQ6 273 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 GREM1O60565 184 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 NUBP1P53384 320 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 UBXN1Q04323 297 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 SYCP1Q15431 976 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 C10orf120Q5SQS8 335 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 ADGRG2Q8IZP9 1017 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 WDTC1Q8N5D0 677 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 STK32AQ8WU08 396 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 CLDN23Q96B33 292 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 STK33Q9BYT3 514 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 KCNH6Q9H252 994 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 CBX8Q9HC52 389 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 DNMT3LQ9UJW3 386 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 PCDHGC3Q9UN70 934 aa27.19■■□□□ 1.94
SMC4-206ENST00000465903 DTWD2Q8NBA8 298 aa27.18■■□□□ 1.94
SMC4-206ENST00000465903 CLEC4CQ8WTT0 213 aa27.18■■□□□ 1.94
SMC4-206ENST00000465903 ATP2A3Q93084 1043 aa27.18■■□□□ 1.94
SMC4-206ENST00000465903 ERGIC2Q96RQ1 377 aa27.18■■□□□ 1.94
SMC4-206ENST00000465903 SLC4A5Q9BY07 1137 aa27.18■■□□□ 1.94
SMC4-206ENST00000465903 FAM207AQ9NSI2 230 aaPredicted RBP27.18■■□□□ 1.94
SMC4-206ENST00000465903 TEX33O43247 280 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 GALR2O43603 387 aaPredicted RBP27.17■■□□□ 1.94
SMC4-206ENST00000465903 IRF1P10914 325 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 GJA4P35212 333 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 POLR2FP61218 127 aaKnown RBP27.17■■□□□ 1.94
SMC4-206ENST00000465903 BSPRYQ5W0U4 402 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 BTBD8Q5XKL5 378 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 C1orf228Q6PIY5 440 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 TADA2BQ86TJ2 420 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 CPA6Q8N4T0 437 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 IRGQQ8WZA9 623 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 SH3BP1Q9Y3L3 701 aa27.17■■□□□ 1.94
SMC4-206ENST00000465903 F8VZ95 297 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 CHRNB1P11230 501 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 BPIFB4P59827 614 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 EFEMP1Q12805 493 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 PON2Q15165 354 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 HTR3DQ70Z44 454 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 CDK5RAP1Q96SZ6 601 aaKnown RBP27.16■■□□□ 1.94
SMC4-206ENST00000465903 LHX5Q9H2C1 402 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 RTN4Q9NQC3 1192 aaKnown RBP27.16■■□□□ 1.94
SMC4-206ENST00000465903 TBC1D14Q9P2M4 693 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 RASAL2Q9UJF2 1139 aa27.16■■□□□ 1.94
SMC4-206ENST00000465903 SLC9A3R1O14745 358 aaPredicted RBP27.15■■□□□ 1.94
SMC4-206ENST00000465903 JAM2P57087 298 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 TCF15Q12870 199 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 DHCR24Q15392 516 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 NFKBIBQ15653 356 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 GAB4Q2WGN9 574 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 NAIF1Q69YI7 327 aaPredicted RBP27.15■■□□□ 1.94
SMC4-206ENST00000465903 TMEM110Q86TL2 294 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 BBS7Q8IWZ6 715 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 SCUBE3Q8IX30 993 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 PRRX2Q99811 253 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 MIS12Q9H081 205 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 LMAN1LQ9HAT1 526 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 NLRC4Q9NPP4 1024 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 ST7Q9NRC1 585 aa27.15■■□□□ 1.94
SMC4-206ENST00000465903 ARIH1Q9Y4X5 557 aaPredicted RBP27.15■■□□□ 1.94
SMC4-206ENST00000465903 CACNA1HO95180 2353 aa27.14■■□□□ 1.94
SMC4-206ENST00000465903 TRDMT1O14717 391 aaKnown RBP27.14■■□□□ 1.94
SMC4-206ENST00000465903 NCAM2O15394 837 aa27.14■■□□□ 1.94
SMC4-206ENST00000465903 FBXO21O94952 628 aa27.14■■□□□ 1.94
SMC4-206ENST00000465903 NFATC1O95644 943 aa27.14■■□□□ 1.94
SMC4-206ENST00000465903 CYP17A1P05093 508 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms