RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CLIC4Q9Y696 253 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PDCD11Q14690 1871 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 DENND3A2RUS2 1198 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 VWA3AA6NCI4 1184 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TBKBP1A7MCY6 615 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 H3BNC9 293 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TSPAN1O60635 241 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 RPLP2P05387 115 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ITGB1P05556 798 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ZNF20P17024 532 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 POU3F3P20264 500 aaPredicted RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TMOD1P28289 359 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 GTF2F1P35269 517 aaKnown RBP eCLIP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 BMPR1AP36894 532 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PRPHP41219 470 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 DNM2P50570 870 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PTENP60484 403 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 MAPK7Q13164 816 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ORC2Q13416 577 aaPredicted RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 BTG3Q14201 252 aaPredicted RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PDIA5Q14554 519 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SF3A1Q15459 793 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 DDR2Q16832 855 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 RILPL1Q5EBL4 403 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 GLB1LQ6UWU2 654 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ANKS3Q6ZW76 656 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SLC24A5Q71RS6 500 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 OTUD6AQ7L8S5 288 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ZNF410Q86VK4 478 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PROSER1Q86XN7 944 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ECHDC2Q86YB7 292 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 RNF149Q8NC42 400 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 RNF169Q8NCN4 708 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SLC17A8Q8NDX2 589 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SNX21Q969T3 373 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SCLT1Q96NL6 688 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TMEM209Q96SK2 561 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 C1QTNF3Q9BXJ4 246 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 FTHL17Q9BXU8 183 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TMEM168Q9H0V1 697 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 POLR3FQ9H1D9 316 aaPredicted RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TUFT1Q9NNX1 390 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ALG13Q9NP73 1137 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 SLC6A20Q9NP91 592 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 DDX19AQ9NUU7 478 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 TYW1Q9NV66 732 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 HSPBP1Q9NZL4 362 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PPP4R1LQ9P1A2 415 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 NOL7Q9UMY1 257 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PIN4Q9Y237 131 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 R3HCC1Q9Y3T6 440 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 HES2Q9Y543 173 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 ANK1P16157 1881 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 PLXNA3P51805 1871 aa5.3□□□□□ -1.56
EXOSC3-204ENST00000465860 VWA8A3KMH1 1905 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 A0A087X0B3 334 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 NT5C1B-RDH14C9J2C7 533 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 C5orf67F2Z3F1 127 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 F8W810 466 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 KRIT1O00522 736 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 KLF4O43474 513 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 LAMTOR5O43504 91 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 STX6O43752 255 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 MAFKO60675 156 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 XRCC6P12956 609 aaKnown RBP eCLIP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ARF4P18085 180 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 TNFRSF1AP19438 455 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 MARCKSP29966 332 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CTNNB1P35222 781 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 KCNQ1P51787 676 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CEBPZQ03701 1054 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 GPM6BQ13491 265 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 HSP90AA2PQ14568 343 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ZRSR1Q15695 479 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 TMEM119Q4V9L6 283 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 HYIQ5T013 277 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 RINT1Q6NUQ1 792 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 PKN3Q6P5Z2 889 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 RSPO2Q6UXX9 243 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 C1orf186Q6ZWK4 172 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CATSPER4Q7RTX7 472 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ADGRD2Q7Z7M1 963 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 TMEM173Q86WV6 379 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ZNF280BQ86YH2 543 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 RBM12BQ8IXT5 1001 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CMTR2Q8IYT2 770 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 SPPL3Q8TCT6 385 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 NEK9Q8TD19 979 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 PSPC1Q8WXF1 523 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 SGSM3Q96HU1 749 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 USP28Q96RU2 1077 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 GCOM2Q9BZD3 368 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 CCDC113Q9H0I3 377 aa5.29□□□□□ -1.56
EXOSC3-204ENST00000465860 ATP6V0A4Q9HBG4 840 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms