RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 LINC00597Q9H2U6 94 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 HEBP1Q9NRV9 189 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 CLIC5Q9NZA1 410 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 TJP2Q9UDY2 1190 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 ZNF318Q5VUA4 2279 aa12.99□□□□□ -0.33
CHPF2-202ENST00000465601 E5RJQ4 531 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 ARNTLO00327 626 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 FBXO21O94952 628 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 IRF1P10914 325 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 ARSAP15289 507 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TCF3P15923 654 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 CHRNB2P17787 502 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 PBX1P40424 430 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TNK2Q07912 1038 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TMEM31Q5JXX7 168 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 KLHDC10Q6PID8 442 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 RSRC2Q7L4I2 434 aaKnown RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TADA2BQ86TJ2 420 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 ZNF276Q8N554 614 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 CSGALNACT1Q8TDX6 532 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 IRGQQ8WZA9 623 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 BAP1Q92560 729 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 DNASE1L2Q92874 299 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 WBP2Q969T9 261 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 PPP1R13BQ96KQ4 1090 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 FAM83CQ9BQN1 747 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 EBF3Q9H4W6 596 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 TRPV5Q9NQA5 729 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 ARHGEF3Q9NR81 526 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 DUS2Q9NX74 493 aaKnown RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 RASAL2Q9UJF2 1139 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 NOCTQ9UK39 431 aaKnown RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
CHPF2-202ENST00000465601 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
CHPF2-202ENST00000465601 COL4A3Q01955 1670 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 STK25O00506 426 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 LTFP02788 710 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 IFNAR2P48551 515 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 FMO1Q01740 532 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 CDR2Q01850 454 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
CHPF2-202ENST00000465601 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHPF2-202ENST00000465601 ZNF677Q86XU0 584 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 CPA5Q8WXQ8 436 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 NOX5Q96PH1 765 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
CHPF2-202ENST00000465601 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 MFSD1Q9H3U5 465 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 HPS4Q9NQG7 708 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
CHPF2-202ENST00000465601 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 E2F8A0AVK6 867 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 OTOL1A6NHN0 477 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-202ENST00000465601 LRRC53A6NM62 1247 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 ERBB2P04626 1255 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 HMBSP08397 361 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 FERP16591 822 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 CD72P21854 359 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 CDH5P33151 784 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-202ENST00000465601 SOX9P48436 509 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-202ENST00000465601 RUNX3Q13761 415 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 PDGFRLQ15198 375 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 EML3Q32P44 896 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 ITPRIPL2Q3MIP1 535 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 PTPN20Q4JDL3 420 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 NAA35Q5VZE5 725 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 OR6B2Q6IFH4 312 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 BMP8AQ7Z5Y6 402 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 ERICH1Q86X53 443 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 GOLGA1Q92805 767 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 SHDQ96IW2 340 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 PCDHB18PQ96TA0 734 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 NUP58Q9BVL2 599 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 TTYH3Q9C0H2 523 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 RBSNQ9H1K0 784 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 SYNCQ9H7C4 482 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 TBC1D17Q9HA65 648 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms