RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ADH1CP00326 375 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 SEC13P55735 322 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 YWHAEP62258 255 aaKnown RBP22.91■■□□□ 1.26
LIME1-203ENST00000465591 TMEM270Q6UE05 265 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 HTR3DQ70Z44 454 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 BHLHA9Q7RTU4 235 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 TMEM25Q86YD3 366 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 PPM1KQ8N3J5 372 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 UBA3Q8TBC4 463 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 NDRG1Q92597 394 aaKnown RBP22.91■■□□□ 1.26
LIME1-203ENST00000465591 EXOC4Q96A65 974 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 OTUB2Q96DC9 234 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 RWDD2AQ9UIY3 292 aa22.91■■□□□ 1.26
LIME1-203ENST00000465591 GNA14O95837 355 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 VDRP11473 427 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 PKDCCQ504Y2 493 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 C10orf120Q5SQS8 335 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 KLHDC10Q6PID8 442 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 RRAGAQ7L523 313 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 WDR5BQ86VZ2 330 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 KIAA2013Q8IYS2 634 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 PHTF2Q8N3S3 785 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 EHBP1Q8NDI1 1231 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 USP33Q8TEY7 942 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 KREMEN1Q96MU8 473 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 HHIPQ96QV1 700 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 CLSTN2Q9H4D0 955 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 SLC8A2Q9UPR5 921 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 PCDHB4Q9Y5E5 795 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.9■■□□□ 1.26
LIME1-203ENST00000465591 DMXL1Q9Y485 3027 aa22.9■■□□□ 1.26
LIME1-203ENST00000465591 RALGAPA1Q6GYQ0 2036 aa22.89■■□□□ 1.26
LIME1-203ENST00000465591 XPO1O14980 1071 aaKnown RBP22.89■■□□□ 1.25
LIME1-203ENST00000465591 AFPP02771 609 aaKnown RBP22.89■■□□□ 1.25
LIME1-203ENST00000465591 TKTL1P51854 596 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 BCAT1P54687 386 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 KDSRQ06136 332 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 C2orf27AQ580R0 203 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 PRR23BQ6ZRT6 265 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 SYT13Q7L8C5 426 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 IRF2BP1Q8IU81 584 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 ETFBKMTQ8IXQ9 262 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 ZNF276Q8N554 614 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 NAT16Q8N8M0 369 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 P2RY11Q96G91 374 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 PNKPQ96T60 521 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 ULBP1Q9BZM6 244 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 SPHK2Q9NRA0 654 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 CLIC5Q9NZA1 410 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 NCDNQ9UBB6 729 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 DNMT3LQ9UJW3 386 aa22.89■■□□□ 1.25
LIME1-203ENST00000465591 TRIM24O15164 1050 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 HOXC11O43248 304 aaPredicted RBP22.88■■□□□ 1.25
LIME1-203ENST00000465591 GABBR2O75899 941 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 KAT7O95251 611 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 EIF2DP41214 584 aaKnown RBP22.88■■□□□ 1.25
LIME1-203ENST00000465591 PSEN1P49768 467 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 GAD2Q05329 585 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 BST2Q10589 180 aaKnown RBP22.88■■□□□ 1.25
LIME1-203ENST00000465591 SIM2Q14190 667 aaPredicted RBP22.88■■□□□ 1.25
LIME1-203ENST00000465591 DMC1Q14565 340 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 Q6ZNB5 142 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 MIB1Q86YT6 1006 aa22.88■■□□□ 1.25
LIME1-203ENST00000465591 INTS2Q9H0H0 1204 aaKnown RBP22.88■■□□□ 1.25
LIME1-203ENST00000465591 STC2O76061 302 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 KLKB1P03952 638 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 PAEPP09466 180 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 RALAP11233 206 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 BRD2P25440 801 aaKnown RBP22.87■■□□□ 1.25
LIME1-203ENST00000465591 PLA2G4AP47712 749 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 ZNF132P52740 706 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 CETN1Q12798 172 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 ANO4Q32M45 955 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 EMC10Q5UCC4 262 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 PM20D1Q6GTS8 502 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 LCLAT1Q6UWP7 414 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 RBBP8NLQ8NC74 664 aaPredicted RBP22.87■■□□□ 1.25
LIME1-203ENST00000465591 CNOT6LQ96LI5 555 aaKnown RBP22.87■■□□□ 1.25
LIME1-203ENST00000465591 ZDHHC4Q9NPG8 344 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 ARHGEF4Q9NR80 690 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 HESX1Q9UBX0 185 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 RASAL2Q9UJF2 1139 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 DCHS1Q96JQ0 3298 aa22.87■■□□□ 1.25
LIME1-203ENST00000465591 A0A0A0MRY4 1105 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 TULP3O75386 442 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 ZBED1O96006 694 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 CCDC192P0DO97 292 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 TGM1P22735 817 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 YWHAGP61981 247 aaKnown RBP eCLIP22.86■■□□□ 1.25
LIME1-203ENST00000465591 GCNT1Q02742 428 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 ADIGQ0VDE8 80 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 EFEMP1Q12805 493 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 CCDC33Q8N5R6 958 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 ACDQ96AP0 544 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 PARD6AQ9NPB6 346 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 KIAA1257Q9ULG3 409 aa22.86■■□□□ 1.25
LIME1-203ENST00000465591 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.86■■□□□ 1.25
LIME1-203ENST00000465591 APODP05090 189 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 HNRNPLP14866 589 aaKnown RBP eCLIP22.85■■□□□ 1.25
LIME1-203ENST00000465591 CNR2P34972 360 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms