RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PSG1P11464 419 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 BRAFP15056 766 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 MCM5P33992 734 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 HSF1Q00613 529 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 SLC14A1Q13336 389 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 SLC29A2Q14542 456 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 SLC9C1Q4G0N8 1177 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 UBE2Q1Q7Z7E8 422 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 ARFGAP1Q8N6T3 406 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 ZNF548Q8NEK5 533 aaPredicted RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 SMCR8Q8TEV9 937 aaPredicted RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 EDC3Q96F86 508 aaKnown RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 ZFYVE19Q96K21 471 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 ZNF668Q96K58 619 aaPredicted RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 TRMOQ9BU70 441 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 AFF4Q9UHB7 1163 aaKnown RBP6.13□□□□□ -1.43
SMC4-205ENST00000465563 TPCN1Q9ULQ1 816 aa6.13□□□□□ -1.43
SMC4-205ENST00000465563 CCDC187A0A096LP49 1063 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 ANKRD62A6NC57 917 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 FAM227AF5H4B4 570 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 ALPLP05186 524 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 EPHB1P54762 984 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 YPEL5P62699 121 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 STK3Q13188 491 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 ST3GAL2Q16842 350 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 KIAA1161Q6NSJ0 714 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 C9orf47Q6ZRZ4 202 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 KIAA0319LQ8IZA0 1049 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 PNPLA1Q8N8W4 532 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 STAG1Q8WVM7 1258 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 VPS50Q96JG6 964 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 ZIM2Q9NZV7 527 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 RIMKLBQ9ULI2 386 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 LRP12Q9Y561 859 aa6.12□□□□□ -1.43
SMC4-205ENST00000465563 AQP7P3A6NL99 342 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 AGPSO00116 658 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 RAB27BO00194 218 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 FRS3O43559 492 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 TULP3O75386 442 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
SMC4-205ENST00000465563 ACVR2AP27037 513 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 TACR3P29371 465 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 THBS3P49746 956 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 DEUP1Q05D60 604 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 STIM1Q13586 685 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 CNN3Q15417 329 aaKnown RBP6.11□□□□□ -1.43
SMC4-205ENST00000465563 CNGA2Q16280 664 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 PFKFB3Q16875 520 aaPredicted RBP6.11□□□□□ -1.43
SMC4-205ENST00000465563 APOA5Q6Q788 366 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 METTL25Q8N6Q8 603 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 MPLKIPQ8TAP9 179 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 KAZALD1Q96I82 304 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 FAM83DQ9H4H8 585 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 USP29Q9HBJ7 922 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 WWOXQ9NZC7 414 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 STEAP1Q9UHE8 339 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 L1RE1Q9UN81 338 aa6.11□□□□□ -1.43
SMC4-205ENST00000465563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.1□□□□□ -1.43
SMC4-205ENST00000465563 FYB1O15117 783 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 U2AF1L5P0DN76 240 aaPredicted RBP6.1□□□□□ -1.43
SMC4-205ENST00000465563 TPH1P17752 444 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 ADRA1DP25100 572 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 CPA2P48052 419 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 CPT1AP50416 773 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 GPC5P78333 572 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 U2AF1Q01081 240 aaKnown RBP eCLIP6.1□□□□□ -1.435e-12■■■■■ 47.2
SMC4-205ENST00000465563 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 C3orf38Q5JPI3 329 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 COLCA1Q6ZS62 124 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 MEPCEQ7L2J0 689 aaKnown RBP6.1□□□□□ -1.43
SMC4-205ENST00000465563 YAF2Q8IY57 180 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 LYZL4Q96KX0 146 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 FZD4Q9ULV1 537 aa6.1□□□□□ -1.43
SMC4-205ENST00000465563 FAM90A8PA6NJQ4 464 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 SNX2O60749 519 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 TOMM40O96008 361 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 FAM90A13PP0C7W8 464 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 FAM90A24PP0C7X0 464 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 TXNL4AP83876 142 aaKnown RBP6.09□□□□□ -1.43
SMC4-205ENST00000465563 CXorf57Q6NSI4 855 aaKnown RBP6.09□□□□□ -1.43
SMC4-205ENST00000465563 USP49Q70CQ1 688 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 FAM71DQ8N9W8 422 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 HIST1H2AAQ96QV6 131 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 RGS17Q9UGC6 210 aaPredicted RBP6.09□□□□□ -1.43
SMC4-205ENST00000465563 MID2Q9UJV3 735 aa6.09□□□□□ -1.43
SMC4-205ENST00000465563 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.09□□□□□ -1.43
SMC4-205ENST00000465563 B4DGG1 531 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 INPPL1O15357 1258 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 INMTO95050 263 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 CD63P08962 238 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
SMC4-205ENST00000465563 EIF4A1P60842 406 aaKnown RBP6.08□□□□□ -1.44
SMC4-205ENST00000465563 RPS16P62249 146 aaKnown RBP6.08□□□□□ -1.44
SMC4-205ENST00000465563 MTX1Q13505 466 aa6.08□□□□□ -1.44
SMC4-205ENST00000465563 ZCWPW1Q9H0M4 648 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms