RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 BCLAF3A2AJT9 711 aaKnown RBP19.03■□□□□ 0.64
SYNE4-204ENST00000465425 COPEO14579 308 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 DHRS4L1P0CG22 281 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 ETV4P43268 484 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 ARFIP2P53365 341 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 SLC9A4Q6AI14 798 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 TLDC1Q6P9B6 456 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 FASTKD5Q7L8L6 764 aaKnown RBP19.03■□□□□ 0.64
SYNE4-204ENST00000465425 PRPF39Q86UA1 669 aaKnown RBP19.03■□□□□ 0.64
SYNE4-204ENST00000465425 SESTD1Q86VW0 696 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 PCDH19Q8TAB3 1148 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 ZNF670Q9BS34 389 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 KCNH4Q9UQ05 1017 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 TRIM49D1C9J1S8 452 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 MDM4O15151 490 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 PTPN4P29074 926 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 EPHB2P29323 1055 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 MTHFD1LQ6UB35 978 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 TTC30AQ86WT1 665 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 USP6NLQ92738 828 aa19.03■□□□□ 0.64
SYNE4-204ENST00000465425 TRAFD1O14545 582 aaPredicted RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 SNRPAP09012 282 aaKnown RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 CLNS1AP54105 237 aaKnown RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 ZBTB16Q05516 673 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 PPIL2Q13356 520 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 FAM13CQ8NE31 585 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 PPTC7Q8NI37 304 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 CCDC110Q8TBZ0 833 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 AFG1LQ8WV93 481 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 SRPK1Q96SB4 655 aaKnown RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 MRPL45Q9BRJ2 306 aaKnown RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 HEY2Q9UBP5 337 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 TTLL3Q9Y4R7 772 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 A6NJR5 290 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 TRDMT1O14717 391 aaKnown RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 FAM155BO75949 473 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 HAUS5O94927 633 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 COL1A2P08123 1366 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 SETSIPP0DME0 302 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 BGNP21810 368 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 CA9Q16790 459 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 TMEM110Q86TL2 294 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 CDKL3Q8IVW4 592 aaPredicted RBP19.02■□□□□ 0.64
SYNE4-204ENST00000465425 VPS52Q8N1B4 723 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 OPTNQ96CV9 577 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 SLC4A5Q9BY07 1137 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 POPDC2Q9HBU9 364 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 LNPEPQ9UIQ6 1025 aa19.02■□□□□ 0.64
SYNE4-204ENST00000465425 TGDSO95455 350 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 GRM5P41594 1212 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 SERPINB4P48594 390 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 PRKD1Q15139 912 aaPredicted RBP19.01■□□□□ 0.63
SYNE4-204ENST00000465425 C4orf22Q6V702 233 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 SH2D5Q6ZV89 423 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 CAND1Q86VP6 1230 aaKnown RBP19.01■□□□□ 0.63
SYNE4-204ENST00000465425 ZDHHC17Q8IUH5 632 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 LRRC39Q96DD0 335 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 TUBB6Q9BUF5 446 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 ZNF180Q9UJW8 692 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 MTO1Q9Y2Z2 717 aaKnown RBP19.01■□□□□ 0.63
SYNE4-204ENST00000465425 PAPPA2Q9BXP8 1791 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 PAPSS1O43252 624 aaPredicted RBP19.01■□□□□ 0.63
SYNE4-204ENST00000465425 CYP2F1P24903 491 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 HDAC4P56524 1084 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 PKDCCQ504Y2 493 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 ANKRD20A3Q5VUR7 823 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 LRRN4Q8WUT4 740 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 SLC35F5Q8WV83 523 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 NRDE2Q9H7Z3 1164 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 RNPEPL1Q9HAU8 725 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 GINS2Q9Y248 185 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 MAD1L1Q9Y6D9 718 aa19.01■□□□□ 0.63
SYNE4-204ENST00000465425 H3BRB1 525 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 APOEP02649 317 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 CBLBQ13191 982 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 CTC1Q2NKJ3 1217 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 DCAF4L1Q3SXM0 396 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 TAPT1Q6NXT6 567 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 C7orf31Q8N865 590 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 OR6B3Q8NGW1 331 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 TMEM120AQ9BXJ8 343 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 B3GNT5Q9BYG0 378 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 DHX35Q9H5Z1 703 aaKnown RBP19■□□□□ 0.63
SYNE4-204ENST00000465425 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
SYNE4-204ENST00000465425 KANSL3Q9P2N6 904 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 I3L4J1 428 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 CCDC22O60826 627 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 KRT38O76015 456 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 NPTXRO95502 500 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 PRKCHP24723 683 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 APBB1IPQ7Z5R6 666 aaPredicted RBP19■□□□□ 0.63
SYNE4-204ENST00000465425 SHCBP1Q8NEM2 672 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 APBB2Q92870 758 aa19■□□□□ 0.63
SYNE4-204ENST00000465425 ZSWIM8A7E2V4 1837 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 SLC15A5A6NIM6 579 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 CXorf49A8MYA2 514 aaPredicted RBP18.99■□□□□ 0.63
SYNE4-204ENST00000465425 GSTA2P09210 222 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 ZFXP17010 805 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms