RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 ELF1P32519 619 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CCT6AP40227 531 aaKnown RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 PCBP3P57721 371 aaKnown RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 GABREP78334 506 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 GUCY1B3Q02153 619 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 DMP1Q13316 513 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 ZNF174Q15697 407 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 PSMD5Q16401 504 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 ME3Q16798 604 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 FAM187BQ17R55 369 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 TM4SF20Q53R12 229 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 EARS2Q5JPH6 523 aaKnown RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RTP2Q5QGT7 225 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 TTC38Q5R3I4 469 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 FAM171A1Q5VUB5 890 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CDCA2Q69YH5 1023 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 DENND5AQ6IQ26 1287 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 SPATA31D4Q6ZUB0 917 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 TMPRSS7Q7RTY8 843 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CDR2LQ86X02 465 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CCDC83Q8IWF9 413 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 ELMOD1Q8N336 334 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 HASPINQ8TF76 798 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 FRS2Q8WU20 508 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 ZSCAN31Q96LW9 406 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 UROC1Q96N76 676 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 HSD17B14Q9BPX1 270 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 LLPHQ9BRT6 129 aaKnown RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RHOBTB2Q9BYZ6 727 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 FOXP1Q9H334 677 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 SMOC2Q9H3U7 446 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RXFP1Q9HBX9 757 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 GPRC5CQ9NQ84 441 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 EPS15L1Q9UBC2 864 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 WNT16Q9UBV4 365 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 TCFL5Q9UL49 500 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RNF112Q9ULX5 631 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CA14Q9ULX7 337 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 LIMCH1Q9UPQ0 1083 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 GDAQ9Y2T3 454 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 BDP1A6H8Y1 2624 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 MIA3Q5JRA6 1907 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 XIRP2A4UGR9 3374 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MYH11P35749 1972 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 A0A1B0GUA9 196 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CCDC169A6NNP5 214 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 PROB1E7EW31 1015 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 K7ERI5 159 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ACKR2O00590 384 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 TGM5O43548 720 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 JAK2O60674 1132 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 RFPL2O75678 378 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 B3GAT3O94766 335 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ESR1P03372 595 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 THBDP07204 575 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 C8AP07357 584 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 GSTM1P09488 218 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 FDPSP14324 419 aaKnown RBP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CYP11B2P19099 503 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 HOXA9P31269 272 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 NBL1P41271 181 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MATR3P43243 847 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 TRAPPC10P48553 1259 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 PFKPQ01813 784 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 STRN3Q13033 797 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ANGPT1Q15389 498 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ZNF568Q3ZCX4 644 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ATF7IP2Q5U623 682 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 KRT79Q5XKE5 535 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 PRSS55Q6UWB4 352 aaPredicted RBP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 RTL10Q7L3V2 364 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 TAS1R1Q7RTX1 841 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CATSPER3Q86XQ3 398 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 NOSTRINQ8IVI9 506 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 RNF168Q8IYW5 571 aaPredicted RBP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 SLC7A14Q8TBB6 771 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 RABGGTAQ92696 567 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 SECISBP2LQ93073 1101 aaKnown RBP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CDK5RAP3Q96JB5 506 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MTMR9Q96QG7 549 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 NT5C3AQ9H0P0 336 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 SEMA4AQ9H3S1 761 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 PDZD7Q9H5P4 517 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 SLC38A7Q9NVC3 462 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MIOSQ9NXC5 875 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 DNM3Q9UQ16 869 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MORC2Q9Y6X9 1032 aaPredicted RBP6.32□□□□□ -1.4
SSBP1-204ENST00000465167 MYH15Q9Y2K3 1946 aa6.32□□□□□ -1.4
SSBP1-204ENST00000465167 CITO14578 2027 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms