RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CEP76Q8TAP6 659 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 SH3RF2Q8TEC5 729 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 HMGB4Q8WW32 186 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 THAP9Q9H5L6 903 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 ASB7Q9H672 318 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
SSR3-202ENST00000463503 TRPC7Q9HCX4 862 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 ZDHHC4Q9NPG8 344 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 MAGED2Q9UNF1 606 aaPredicted RBP11.86□□□□□ -0.51
SSR3-202ENST00000463503 FRMD4BQ9Y2L6 1034 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 DERAQ9Y315 318 aa11.86□□□□□ -0.51
SSR3-202ENST00000463503 SPTA1P02549 2419 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 A0A087WV48 116 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 SMTNL1A8MU46 457 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 MAP3K13O43283 966 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 EXOC3O60645 756 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 CBFA2T3O75081 653 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 KLF8O95600 359 aaPredicted RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 NFATC1O95644 943 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 CSH1P0DML2 217 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 CSH2P0DML3 217 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 STX17P56962 302 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 SLC14A1Q13336 389 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 NCAPHQ15003 741 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 PSMD6Q15008 389 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 JADE1Q6IE81 842 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 INTS8Q75QN2 995 aaKnown RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 GLRX5Q86SX6 157 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 SLCO6A1Q86UG4 719 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 C12orf40Q86WS4 652 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 SLC41A1Q8IVJ1 513 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 TTC16Q8NEE8 873 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 FAM213AQ9BRX8 229 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
SSR3-202ENST00000463503 DSEQ9UL01 958 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
SSR3-202ENST00000463503 TRAV19A0A0A6YYK7 116 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 TCRBV21S2A2A0A5A6 115 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 AP5Z1O43299 807 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 DKK1O94907 266 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 EPB41P11171 864 aaKnown RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 ZNF18P17022 549 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 PAX3P23760 479 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 ACOT2P49753 483 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 CYP2J2P51589 502 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 RPL6Q02878 288 aaKnown RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 CYP24A1Q07973 514 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 CCDC142Q17RM4 750 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 CDKAL1Q5VV42 579 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 IRF2BP1Q8IU81 584 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 FAM114A1Q8IWE2 563 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 PHTF2Q8N3S3 785 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 DEFB119Q8N690 84 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 ARL14EPQ8N8R7 260 aaPredicted RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 SAAL1Q96ER3 474 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 PI4K2AQ9BTU6 479 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
SSR3-202ENST00000463503 BCCIPQ9P287 314 aaKnown RBP eCLIP11.84□□□□□ -0.51
SSR3-202ENST00000463503 C2CD2Q9Y426 696 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 NFE2L3Q9Y4A8 694 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
SSR3-202ENST00000463503 KNTC1P50748 2209 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 IGHV1OR15-9A0A0B4J2B8 117 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CYB561D2O14569 222 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 PMM2O15305 246 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 KAT7O95251 611 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 TIE1P35590 1138 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 SLC6A11P48066 632 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CASP4P49662 377 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 AP3M2P53677 418 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 ZNF33AQ06730 810 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 NR1H3Q13133 447 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 DDR2Q16832 855 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 EMC10Q5UCC4 262 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CEP135Q66GS9 1140 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 RABEPKQ7Z6M1 372 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CBWD2Q8IUF1 395 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 BAHD1Q8TBE0 780 aaPredicted RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms