RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
COPS3-205ENST00000463097 ANKRD44Q8N8A2 993 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 FAM71DQ8N9W8 422 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 FSIP1Q8NA03 581 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 LINS1Q8NG48 757 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 TMEM176AQ96HP8 235 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 RBM17Q96I25 401 aaKnown RBP6.39□□□□□ -1.39
COPS3-205ENST00000463097 PAAF1Q9BRP4 392 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 AP1M1Q9BXS5 423 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 IL21RQ9HBE5 538 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 PLA2G3Q9NZ20 509 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 CNOT7Q9UIV1 285 aaKnown RBP6.39□□□□□ -1.39
COPS3-205ENST00000463097 NAALADL1Q9UQQ1 740 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 ZBTB1Q9Y2K1 713 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 SLC27A6Q9Y2P4 619 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
COPS3-205ENST00000463097 SYNDIG1LA6NDD5 238 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 TOR1BO14657 336 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 FFAR3O14843 346 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 IPO13O94829 963 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 SGPL1O95470 568 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 SCGB1D1O95968 90 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 HLA-DOAP06340 250 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 HSPA1AP0DMV8 641 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 HSPA1BP0DMV9 641 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 PI3P19957 117 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 GLDCP23378 1020 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 ADORA2AP29274 412 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 MAPK4P31152 587 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 GALNSP34059 522 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 TERF1P54274 439 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 RNASE9P60153 205 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 MC2RQ01718 297 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 DCTN1Q14203 1278 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 SSPNQ14714 243 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 ACOX1Q15067 660 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 SEC23BQ15437 767 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 NFIL3Q16649 462 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 TMEM196Q5HYL7 178 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 FAM69AQ5T7M9 428 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 LIPMQ5VYY2 423 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 SYNE3Q6ZMZ3 975 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 CPLX4Q7Z7G2 160 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 ZNF761Q86XN6 746 aaPredicted RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 RHOT2Q8IXI1 618 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 DIS3L2Q8IYB7 885 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 C11orf44Q8N8P7 122 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 MDGA1Q8NFP4 955 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 KCNG4Q8TDN1 519 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 SLC22A17Q8WUG5 538 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 PLSCR4Q9NRQ2 329 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 TBC1D14Q9P2M4 693 aa6.38□□□□□ -1.39
COPS3-205ENST00000463097 OAS3Q9Y6K5 1087 aaKnown RBP6.38□□□□□ -1.39
COPS3-205ENST00000463097 AATKQ6ZMQ8 1374 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 SPATA31A3Q5VYP0 1347 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 PEX12O00623 359 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CTIFO43310 598 aaKnown RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 GUCY1B2O75343 617 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 INHBBP09529 407 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 ACADMP11310 421 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 ACTN2P35609 894 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 GGT5P36269 586 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 GSTM5P46439 218 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 NDUFV1P49821 464 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 ANXA11P50995 505 aaKnown RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 PDE6CP51160 858 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CAMK1Q14012 370 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 GRM7Q14831 915 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 PRICKLE4Q2TBC4 344 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CBWD5Q5RIA9 395 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 FAM102AQ5T9C2 384 aaPredicted RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 ATF7IPQ6VMQ6 1270 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 ABRAQ8N0Z2 381 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CUL5Q93034 780 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 NSUN4Q96CB9 384 aaKnown RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 REXO5Q96IC2 774 aaKnown RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 HAPLN3Q96S86 360 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 NEU1Q99519 415 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 PHF7Q9BWX1 381 aaPredicted RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 USP44Q9H0E7 712 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 EIF2B3Q9NR50 452 aaKnown RBP6.37□□□□□ -1.39
COPS3-205ENST00000463097 RIMKLBQ9ULI2 386 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 CAMK2AQ9UQM7 478 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 SSX2IPQ9Y2D8 614 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 PCDHB7Q9Y5E2 793 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.37□□□□□ -1.39
COPS3-205ENST00000463097 SNX14Q9Y5W7 946 aa6.37□□□□□ -1.39
COPS3-205ENST00000463097 LOC105369274A0A096LPK9 316 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 LOC102723532A0A0G2JNH3 316 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 GXYLT2A0PJZ3 443 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 F5H697 171 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 ETV2O00321 342 aaPredicted RBP6.36□□□□□ -1.39
COPS3-205ENST00000463097 AP3D1O14617 1153 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 P4HA2O15460 535 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 ANP32CO43423 234 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 WDR47O94967 919 aa6.36□□□□□ -1.39
COPS3-205ENST00000463097 JUNBP17275 347 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms