RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 MIB1Q86YT6 1006 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 SLC44A3Q8N4M1 653 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 GOLGA1Q92805 767 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 ELSPBP1Q96BH3 223 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 C11orf70Q9BRQ4 267 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.24■□□□□ 0.99
NUP43-205ENST00000463048 GKN1Q9NS71 199 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 IGSF9Q9P2J2 1179 aa21.24■□□□□ 0.99
NUP43-205ENST00000463048 MFAP3LO75121 409 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 HMBSP08397 361 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 ATP5C1P36542 298 aaKnown RBP21.23■□□□□ 0.99
NUP43-205ENST00000463048 PRKCIP41743 596 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 NSFP46459 744 aaKnown RBP21.23■□□□□ 0.99
NUP43-205ENST00000463048 PSEN1P49768 467 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 TBX2Q13207 712 aaPredicted RBP21.23■□□□□ 0.99
NUP43-205ENST00000463048 HGSNATQ68CP4 663 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 YAF2Q8IY57 180 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 CELF5Q8N6W0 485 aaKnown RBP21.23■□□□□ 0.99
NUP43-205ENST00000463048 SPC24Q8NBT2 197 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 OR8K1Q8NGG5 319 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 RIN3Q8TB24 985 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 SH3RF2Q8TEC5 729 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 RNF139Q8WU17 664 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 IRGQQ8WZA9 623 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 KHSRPQ92945 711 aaKnown RBP eCLIP21.23■□□□□ 0.99
NUP43-205ENST00000463048 C18orf8Q96DM3 657 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 ZFYVE19Q96K21 471 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 COL25A1Q9BXS0 654 aaPredicted RBP21.23■□□□□ 0.99
NUP43-205ENST00000463048 CYLDQ9NQC7 956 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 TAS2R14Q9NYV8 317 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 ZMYM5Q9UJ78 669 aa21.23■□□□□ 0.99
NUP43-205ENST00000463048 MYO10Q9HD67 2058 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 AKR1B15C9JRZ8 316 aaPredicted RBP21.22■□□□□ 0.99
NUP43-205ENST00000463048 ECI2O75521 394 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 SERPING1P05155 500 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 UNGP13051 313 aaPredicted RBP21.22■□□□□ 0.99
NUP43-205ENST00000463048 SNX16P57768 344 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 RNASE9P60153 205 aaKnown RBP21.22■□□□□ 0.99
NUP43-205ENST00000463048 ZXDBP98169 803 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 TDGQ13569 410 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 TSR1Q2NL82 804 aaKnown RBP21.22■□□□□ 0.99
NUP43-205ENST00000463048 MSANTD4Q8NCY6 345 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 OLIG1Q8TAK6 271 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 SYN2Q92777 582 aaPredicted RBP21.22■□□□□ 0.99
NUP43-205ENST00000463048 SYT11Q9BT88 431 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 TRPV4Q9HBA0 871 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 CLIC5Q9NZA1 410 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 CFAP97Q9P2B7 532 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 NAALADL1Q9UQQ1 740 aa21.22■□□□□ 0.99
NUP43-205ENST00000463048 HELZP42694 1942 aaKnown RBP21.21■□□□□ 0.99
NUP43-205ENST00000463048 LEFTY2O00292 366 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 CAPN9O14815 690 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 OLFM2O95897 454 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 NCAM1P13591 858 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 GDI1P31150 447 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 TUBP50607 506 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 SLC7A9P82251 487 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 XYLT1Q86Y38 959 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 SCML4Q8N228 414 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 BPIFB1Q8TDL5 484 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 WBP2Q969T9 261 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 ABCC13Q9NSE7 274 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 ABHD10Q9NUJ1 306 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 ZNHIT6Q9NWK9 470 aaKnown RBP21.21■□□□□ 0.99
NUP43-205ENST00000463048 ADAM22Q9P0K1 906 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 SFMBT1Q9UHJ3 866 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 DNMT3LQ9UJW3 386 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 ARHGAP26Q9UNA1 814 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 SORCS3Q9UPU3 1222 aa21.21■□□□□ 0.99
NUP43-205ENST00000463048 GOLGA6L3A6NEY3 463 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 SOBPA7XYQ1 873 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 DDX3XO00571 662 aaKnown RBP eCLIP21.2■□□□□ 0.983e-9■■■□□ 17.3
NUP43-205ENST00000463048 SART1O43290 800 aaKnown RBP21.2■□□□□ 0.98
NUP43-205ENST00000463048 GJB6O95452 261 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 SLC6A3Q01959 620 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 CENPCQ03188 943 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 FAM102AQ5T9C2 384 aaPredicted RBP21.2■□□□□ 0.98
NUP43-205ENST00000463048 OLFML1Q6UWY5 402 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 TOGARAM2Q6ZUX3 1019 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 TADA2BQ86TJ2 420 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 MFSD6LQ8IWD5 586 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 TTC8Q8TAM2 541 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 ADAM32Q8TC27 787 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 DNAJC7Q99615 494 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 TRMT61BQ9BVS5 477 aaKnown RBP21.2■□□□□ 0.98
NUP43-205ENST00000463048 MARCH2Q9P0N8 246 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 ARHGAP20Q9P2F6 1191 aa21.2■□□□□ 0.98
NUP43-205ENST00000463048 SLC12A8A0AV02 714 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 MSI1O43347 362 aaKnown RBP21.19■□□□□ 0.98
NUP43-205ENST00000463048 FYNP06241 537 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 PFKLP17858 780 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 PSMC3P17980 439 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 MMP8P22894 467 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 WEE1P30291 646 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 EIF4A3P38919 411 aaKnown RBP21.19■□□□□ 0.98
NUP43-205ENST00000463048 YWHAZP63104 245 aaKnown RBP21.19■□□□□ 0.98
NUP43-205ENST00000463048 GPC5P78333 572 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 ZNF268Q14587 947 aaPredicted RBP21.19■□□□□ 0.98
NUP43-205ENST00000463048 ZNF77Q15935 545 aa21.19■□□□□ 0.98
NUP43-205ENST00000463048 EFHC1Q5JVL4 640 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms