RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PSEN1	P49768	467 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	TUB	P50607	506 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	BPIFB4	P59827	614 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	GOLGA8F	Q08AF8	430 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	GOLGA8DP	Q0D2H9	430 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	RUNX3	Q13761	415 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	PKDCC	Q504Y2	493 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	RAB41	Q5JT25	222 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	TADA2B	Q86TJ2	420 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SLC47A2	Q86VL8	602 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	FAM71A	Q8IYT1	594 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	TMEM105	Q8N8V8	129 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SLC35F5	Q8WV83	523 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	FAM3C	Q92520	227 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	ATP2A3	Q93084	1043 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	GAN	Q9H2C0	597 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	HSD3B7	Q9H2F3	369 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SYNC	Q9H7C4	482 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	PLCB1	Q9NQ66	1216 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	DNMT3L	Q9UJW3	386 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	LSM7	Q9UK45	103 aa	Known RBP	10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	STRIP2	Q9ULQ0	834 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SIT1	Q9Y3P8	196 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	MTF2	Q9Y483	593 aa	Predicted RBP	10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	CEP83	Q9Y592	693 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	USP3	Q9Y6I4	520 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SLC12A8	A0AV02	714 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	YJEFN3	A6XGL0	299 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970		E7ENQ6	273 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970		F8VZ95	297 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	ARNTL	O00327	626 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	SLC9A3R1	O14745	358 aa	Predicted RBP	10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	EPHB6	O15197	1021 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	TEX33	O43247	280 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	NFATC1	O95644	943 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	OLFM2	O95897	454 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	AOC1	P19801	751 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CLCN1	P35523	988 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CLCN5	P51795	746 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	STARD6	P59095	220 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	ZXDB	P98169	803 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	ARID5A	Q03989	594 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	NR1H3	Q13133	447 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	IQCB1	Q15051	598 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	PON2	Q15165	354 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	SNX30	Q5VWJ9	437 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	DPY19L2P1	Q6NXN4	242 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CACNA2D4	Q7Z3S7	1137 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	SCUBE3	Q8IX30	993 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	C1orf131	Q8NDD1	294 aa	Known RBP	10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	PJA1	Q8NG27	643 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CLEC4C	Q8WTT0	213 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	OSCP1	Q8WVF1	389 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	KCTD13	Q8WZ19	329 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	WBP2	Q969T9	261 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	FAM149B1	Q96BN6	582 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	FAM83C	Q9BQN1	747 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	STK33	Q9BYT3	514 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	TSPY26P	Q9H489	355 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	LTB4R2	Q9NPC1	389 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CYLD	Q9NQC7	956 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	HPS4	Q9NQG7	708 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	CNGB3	Q9NQW8	809 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	MARCH2	Q9P0N8	246 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	SIK3	Q9Y2K2	1263 aa		10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.08	□□□□□ -0.8
PSMD4-208	ENST00000462970	E2F8	A0AVK6	867 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970		E5RJQ4	531 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	NCAM2	O15394	837 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	FBXO21	O94952	628 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	TARS	P26639	723 aa	Known RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	CTH	P32929	405 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	STAT1	P42224	750 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	GPD2	P43304	727 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	ACADSB	P45954	432 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	DAOA	P59103	153 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	NHLH1	Q02575	133 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	EML3	Q32P44	896 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	BSPRY	Q5W0U4	402 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	TXNDC11	Q6PKC3	985 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	RALGPS2	Q86X27	583 aa	Predicted RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	CCDC105	Q8IYK2	499 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	ZFR	Q96KR1	1074 aa	Known RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	HSFY1	Q96LI6	401 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	NOX5	Q96PH1	765 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	PHOX2B	Q99453	314 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	NAA15	Q9BXJ9	866 aa	Known RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	KLF16	Q9BXK1	252 aa	Predicted RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	ECT2	Q9H8V3	914 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	TRPV5	Q9NQA5	729 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	RBM12	Q9NTZ6	932 aa	Known RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	SEPT11	Q9NVA2	429 aa	Known RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	CLIC5	Q9NZA1	410 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	TBC1D14	Q9P2M4	693 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	CYTH4	Q9UIA0	394 aa		10.07	□□□□□ -0.8
PSMD4-208	ENST00000462970	CACNA1I	Q9P0X4	2223 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms