RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ADIPOQQ15848 244 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 AMOTQ4VCS5 1084 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CCDC92Q53HC0 331 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 RAB41Q5JT25 222 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 DCLRE1AQ6PJP8 1040 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 GALNTL5Q7Z4T8 443 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZC3H18Q86VM9 953 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZNF366Q8N895 744 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MBD6Q96DN6 1003 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MECRQ9BV79 373 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZCWPW1Q9H0M4 648 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SYNPO2LQ9H987 977 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CHODLQ9H9P2 273 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SCPEP1Q9HB40 452 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZHX1Q9UKY1 873 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 RAB27BO00194 218 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TOX4O94842 621 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 SIX3O95343 332 aaPredicted RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 STARD3NLO95772 234 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 SNRPA1P09661 255 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 SELLP14151 372 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 IRF3Q14653 427 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 PLA1AQ53H76 456 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 NCEH1Q6PIU2 408 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ZNF280BQ86YH2 543 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 NDUFAF2Q8N183 169 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ABHD5Q8WTS1 349 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 CTHRC1Q96CG8 243 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 UIMC1Q96RL1 719 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 RANBP17Q9H2T7 1088 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 PLEKHA2Q9HB19 425 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 DNAJB11Q9UBS4 358 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ADAMTS6Q9UKP5 1117 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 RIMKLBQ9ULI2 386 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 BTBD11A6QL63 1104 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 GUCY1B2O75343 617 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 USP1O94782 785 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ATXN1LP0C7T5 689 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 ALADP13716 330 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ATP5JP18859 108 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ZNF135P52742 658 aaPredicted RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 PER3P56645 1201 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TIRAPP58753 221 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 GRM1Q13255 1194 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TCP11X2Q5H9J9 407 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 RINT1Q6NUQ1 792 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 MTHFD1LQ6UB35 978 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 PIK3AP1Q6ZUJ8 805 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TDRD5Q8NAT2 981 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 KYQ8NBH2 561 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 STON2Q8WXE9 905 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ALG3Q92685 438 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 SPATA6Q9NWH7 488 aaPredicted RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 KNSTRNQ9Y448 316 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ATP6V0A2Q9Y487 856 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 CYP3A7-CYP3A51PA0A087WV96 503 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 B5MCH6 92 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 C22orf31O95567 290 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 PLATP00750 562 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 CYP3A7P24462 503 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 KCNJ5P48544 419 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 FAM3BP58499 235 aaPredicted RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 RBP5P82980 135 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 PCLAFQ15004 111 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 BTBD16Q32M84 506 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 KRTCAP3Q53RY4 240 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 ZNF787Q6DD87 383 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TMCO3Q6UWJ1 677 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 KCTD20Q7Z5Y7 419 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMC4-203ENST00000462668 NAT8LQ8N9F0 302 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 NUDT10Q8NFP7 164 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 GPR150Q8NGU9 434 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 MDM1Q8TC05 714 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 NUDT11Q96G61 164 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 PGAM5Q96HS1 289 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 C19orf44Q9H6X5 657 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 CD248Q9HCU0 757 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 HCFC1R1Q9NWW0 138 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 TRMT1Q9NXH9 659 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 KCND2Q9NZV8 630 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 SUCLA2Q9P2R7 463 aaPredicted RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 KCND3Q9UK17 655 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 RCE1Q9Y256 329 aa3.32□□□□□ -1.88
SMC4-203ENST00000462668 RRP7AQ9Y3A4 280 aaKnown RBP3.32□□□□□ -1.88
SMC4-203ENST00000462668 TMEM232C9JQI7 657 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 J3KTA2 159 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 PEX10O60683 326 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 IGHDP01880 384 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 RNASE1P07998 156 aaKnown RBP3.31□□□□□ -1.88
SMC4-203ENST00000462668 ALAS1P13196 640 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 ACP5P13686 325 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 PHKA1P46020 1223 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 MRE11P49959 708 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 STAT5BP51692 787 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 FOXL2P58012 376 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 TMEM62Q0P6H9 643 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 MYO1EQ12965 1108 aa3.31□□□□□ -1.88
SMC4-203ENST00000462668 LRRC55Q6ZSA7 311 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms