RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
CBX3-205ENST00000462165 FAM92AA1XBS5 289 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 A8MXQ7 604 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 NDUFS2O75306 463 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 GNSP15586 552 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 SLC5A3P53794 718 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 TNNC1P63316 161 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 WDR72Q3MJ13 1102 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 SOWAHCQ53LP3 525 aaPredicted RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 SYCP2LQ5T4T6 812 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 C19orf48Q6RUI8 117 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CCNI2Q6ZMN8 369 aaPredicted RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 GLRX5Q86SX6 157 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 PDZD3Q86UT5 571 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 NAXDQ8IW45 347 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CCDC65Q8IXS2 484 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CHPFQ8IZ52 775 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 PNPLA1Q8N8W4 532 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 GLIS3Q8NEA6 775 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 SCAMP5Q8TAC9 235 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 FOXJ1Q92949 421 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 KCNK16Q96T55 309 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 ZDHHC5Q9C0B5 715 aa11.5□□□□□ -0.57
CBX3-205ENST00000462165 CCDC86Q9H6F5 360 aaKnown RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.5□□□□□ -0.57
CBX3-205ENST00000462165 A0A087X0B3 334 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 PRRT4C9JH25 899 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 GFRA2O00451 464 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 EIF3DO15371 548 aaKnown RBP eCLIP11.49□□□□□ -0.57
CBX3-205ENST00000462165 CACNG3O60359 315 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 GREM1O60565 184 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 DLATP10515 647 aaKnown RBP11.49□□□□□ -0.57
CBX3-205ENST00000462165 IRF1P10914 325 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 TYRP14679 529 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 TNNI1P19237 187 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 HOXD13P35453 343 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 STAT6P42226 847 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 GRIK2Q13002 908 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 PSMD6Q15008 389 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 SNRNP35Q16560 246 aaKnown RBP11.49□□□□□ -0.57
CBX3-205ENST00000462165 COL28A1Q2UY09 1125 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 WDR45BQ5MNZ6 344 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 PAQR9Q6ZVX9 377 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 HTR3DQ70Z44 454 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 FAM35AQ86V20 835 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 DNASE2BQ8WZ79 361 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 CGRRF1Q99675 332 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 DMAP1Q9NPF5 467 aaPredicted RBP11.49□□□□□ -0.57
CBX3-205ENST00000462165 CD93Q9NPY3 652 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 MARK1Q9P0L2 795 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 GMIPQ9P107 970 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
CBX3-205ENST00000462165 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 ATP8B3O60423 1300 aa11.49□□□□□ -0.57
CBX3-205ENST00000462165 ACACAQ13085 2346 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 NEDD8-MDP1E9PL57 170 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 TLR5O60602 858 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 CBFA2T3O75081 653 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 MAOBP27338 520 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 ATICP31939 592 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 CYP24A1Q07973 514 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 TOGARAM2Q6ZUX3 1019 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 SLCO6A1Q86UG4 719 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 BBS2Q9BXC9 721 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 PANK2Q9BZ23 570 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 NACA2Q9H009 215 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 XYLT2Q9H1B5 865 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 SLC6A17Q9H1V8 727 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 VRTNQ9H8Y1 702 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 WSB2Q9NYS7 404 aaPredicted RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 KIAA1522Q9P206 1035 aaPredicted RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 PCOLCE2Q9UKZ9 415 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 RAD54BQ9Y620 910 aa11.48□□□□□ -0.57
CBX3-205ENST00000462165 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
CBX3-205ENST00000462165 CKAP5Q14008 2032 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 A0A1B0GTW7 788 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 TGFB1I1O43294 461 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 CISD3P0C7P0 127 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 ZNF883P0CG24 379 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 CD6P30203 668 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 DGKGP49619 791 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 PGFP49763 221 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 MYL6P60660 151 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 TRPC3Q13507 836 aa11.47□□□□□ -0.57
CBX3-205ENST00000462165 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms