RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CCDC33Q8N5R6 958 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
LDB1-203ENST00000461873 NAT16Q8N8M0 369 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 NETO1Q8TDF5 533 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 RNF139Q8WU17 664 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 RMDN1Q96DB5 314 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 BBS2Q9BXC9 721 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 DCLK3Q9C098 648 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
LDB1-203ENST00000461873 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 SPHK2Q9NRA0 654 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 RASAL2Q9UJF2 1139 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 KIAA1257Q9ULG3 409 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
LDB1-203ENST00000461873 A0A1W2PQH9 124 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 CYP26A1O43174 497 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 KLF8O95600 359 aaPredicted RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 CREB5Q02930 508 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 LRMPQ12912 555 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 TPD52L1Q16890 204 aaPredicted RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 C10orf76Q5T2E6 689 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 PPP1R26Q5T8A7 1209 aaPredicted RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 RHBDF2Q6PJF5 856 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 PRR23CQ6ZRP0 262 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 TPGS1Q6ZTW0 290 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 PAQR9Q6ZVX9 377 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 BBS7Q8IWZ6 715 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 TXNDC5Q8NBS9 432 aaKnown RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 KCNV2Q8TDN2 545 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 UCMAQ8WVF2 138 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 APOBEC3GQ9HC16 384 aaKnown RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 FBRSL1Q9HCM7 1045 aaKnown RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 OLA1Q9NTK5 396 aaKnown RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 DNAJC17Q9NVM6 304 aaKnown RBP9.33□□□□□ -0.92
LDB1-203ENST00000461873 HMGXB4Q9UGU5 601 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 EBF1Q9UH73 591 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 MMP17Q9ULZ9 603 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 PCDHGA5Q9Y5G8 931 aa9.33□□□□□ -0.92
LDB1-203ENST00000461873 BEST1O76090 585 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 HMBSP08397 361 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ZDHHC11BP0C7U3 371 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 VDRP11473 427 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 OPRD1P41143 372 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 DPP6P42658 865 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 SLC6A11P48066 632 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 KIF11P52732 1056 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 BCAT1P54687 386 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 EFEMP1Q12805 493 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 CUL2Q13617 745 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 CRY1Q16526 586 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ZCWPW2Q504Y3 356 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 PKN3Q6P5Z2 889 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 HTR3DQ70Z44 454 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 CCDC186Q7Z3E2 898 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ELOA2Q8IYF1 753 aaPredicted RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 PPM1KQ8N3J5 372 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ALLCQ8N6M5 410 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 ANKRD52Q8NB46 1076 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ZMIZ2Q8NF64 920 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 USP33Q8TEY7 942 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 NELFBQ8WX92 580 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 ERCC4Q92889 916 aaPredicted RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 TWNKQ96RR1 684 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 TPSD1Q9BZJ3 242 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 UBXN6Q9BZV1 441 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 CYLDQ9NQC7 956 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 VPS45Q9NRW7 570 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 TMEM30AQ9NV96 361 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 CLIC5Q9NZA1 410 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 IL37Q9NZH6 218 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 PCDHB4Q9Y5E5 795 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 EP300Q09472 2414 aaPredicted RBP9.32□□□□□ -0.92
LDB1-203ENST00000461873 MYOFQ9NZM1 2061 aa9.32□□□□□ -0.92
LDB1-203ENST00000461873 SPAG17Q6Q759 2223 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TCRBV21S2A2A0A5A6 115 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 SLC12A8A0AV02 714 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 TRIM49BA6NDI0 452 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 K7EQS6 105 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 BIN1O00499 593 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 HOXC11O43248 304 aaPredicted RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 TULP3O75386 442 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 EPN2O95208 641 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TBX18O95935 607 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 ZBED1O96006 694 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms