RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 DEC1Q9P2X7 70 aa15.54■□□□□ 0.08
SMPD4-216ENST00000461187 MBD1Q9UIS9 605 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-216ENST00000461187 HCN2Q9UL51 889 aa15.54■□□□□ 0.08
SMPD4-216ENST00000461187 TRAF3IP3Q9Y228 551 aa15.54■□□□□ 0.08
SMPD4-216ENST00000461187 FRMD4BQ9Y2L6 1034 aa15.54■□□□□ 0.08
SMPD4-216ENST00000461187 TBC1D3BA6NDS4 549 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 HHLA1C9JL84 531 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 CDX4O14627 284 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-216ENST00000461187 TRIM24O15164 1050 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 TBX18O95935 607 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 IRX4P78413 519 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 INCA1Q0VD86 236 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 ANO4Q32M45 955 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 MAP7D1Q3KQU3 841 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 CLEC20AQ6ZU45 233 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 HTR3DQ70Z44 454 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 TERB1Q8NA31 727 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 KCNV2Q8TDN2 545 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 PIGKQ92643 395 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 SPACA7Q96KW9 195 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 TWNKQ96RR1 684 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 HNRNPABQ99729 332 aaKnown RBP15.53■□□□□ 0.08
SMPD4-216ENST00000461187 NACA2Q9H009 215 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 CYLDQ9NQC7 956 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMPD4-216ENST00000461187 OSER1Q9NX31 292 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMPD4-216ENST00000461187 SCML2Q9UQR0 700 aa15.53■□□□□ 0.08
SMPD4-216ENST00000461187 KNL1Q8NG31 2342 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 NUMA1Q14980 2115 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 TCRBV21S2A2A0A5A6 115 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 GIPC1O14908 333 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 MAPK13O15264 365 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 FAM200BP0CF97 657 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 ADORA2BP29275 332 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 VAMP7P51809 220 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 NFIL3Q16649 462 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 PREPLQ4J6C6 727 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 LPCAT2Q7L5N7 544 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 MIB1Q86YT6 1006 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 TMEFF1Q8IYR6 380 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 ZNF513Q8N8E2 541 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 CYFIP2Q96F07 1278 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 APOBEC3GQ9HC16 384 aaKnown RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 TMEM9BQ9NQ34 198 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 EVLQ9UI08 416 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-216ENST00000461187 STARD13Q9Y3M8 1113 aa15.52■□□□□ 0.08
SMPD4-216ENST00000461187 TP53BP1Q12888 1972 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-216ENST00000461187 CHD6Q8TD26 2715 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 FAM237AA0A1B0GTK4 181 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 CYP26A1O43174 497 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 MAP3K13O43283 966 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 RHOBTB3O94955 611 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 ATP5C1P36542 298 aaKnown RBP15.51■□□□□ 0.07
SMPD4-216ENST00000461187 PTGER3P43115 390 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 GCLMP48507 274 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 NOVA1P51513 510 aaKnown RBP15.51■□□□□ 0.07
SMPD4-216ENST00000461187 PPP3CAQ08209 521 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 BYSLQ13895 437 aaKnown RBP15.51■□□□□ 0.07
SMPD4-216ENST00000461187 C10orf76Q5T2E6 689 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 ARMCX6Q7L4S7 300 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 TRMT11Q7Z4G4 463 aaKnown RBP15.51■□□□□ 0.07
SMPD4-216ENST00000461187 PGBD3Q8N328 593 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 TAS1R2Q8TE23 839 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 NT5C1AQ9BXI3 368 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 CYP3A43Q9HB55 503 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 NMUR1Q9HB89 426 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 PNPLA8Q9NP80 782 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 TMEM74BQ9NUR3 256 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 PCDHA5Q9Y5H7 936 aa15.51■□□□□ 0.07
SMPD4-216ENST00000461187 A0A1W2PQF6 199 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 NEDD8-MDP1E9PL57 170 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 CACNG3O60359 315 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 TRIM49P0CI25 452 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 TRIM49CP0CI26 452 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 TYRP14679 529 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 GABRG2P18507 467 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 ACO1P21399 889 aaKnown RBP15.5■□□□□ 0.07
SMPD4-216ENST00000461187 NR2F2P24468 414 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 NTSR1P30989 418 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 SYKP43405 635 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 NDUFA8P51970 172 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 TRIM61Q5EBN2 209 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 SPDYCQ5MJ68 293 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 SH3PXD2AQ5TCZ1 1133 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 EGFLAMQ63HQ2 1017 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 GRAMD4Q6IC98 578 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 KLHDC10Q6PID8 442 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 NUDT18Q6ZVK8 323 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 INTS8Q75QN2 995 aaKnown RBP15.5■□□□□ 0.07
SMPD4-216ENST00000461187 SYT12Q8IV01 421 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 JAKMIP2Q96AA8 810 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
SMPD4-216ENST00000461187 BBS2Q9BXC9 721 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms