RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LY6KQ17RY6 165 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 EDRF1Q3B7T1 1238 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 C16orf59Q7L2K0 433 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 COLGALT1Q8NBJ5 622 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 ATP9AO75110 1047 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 DPEP1P16444 411 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 NECAB2Q7Z6G3 386 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 LPCAT1Q8NF37 534 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 VPS28Q9UK41 221 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
SNX27-204ENST00000458013 KIF1CO43896 1103 aaKnown RBP20.24■□□□□ 0.83
SNX27-204ENST00000458013 KLHL18O94889 574 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 FYNP06241 537 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 KDM7AQ6ZMT4 941 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 LRRN4CLQ8ND94 238 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 PAIP2BQ9ULR5 123 aaKnown RBP20.24■□□□□ 0.83
SNX27-204ENST00000458013 CYP11B2P19099 503 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 AGKQ53H12 422 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 SEL1L3Q68CR1 1132 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 SPOCD1Q6ZMY3 1216 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 MYL6P60660 151 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 COMMD2Q86X83 199 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 TATDN2Q93075 761 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 RMND5AQ9H871 391 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 TBX3O15119 743 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 FOXP2O15409 715 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 USP39Q53GS9 565 aaKnown RBP20.24■□□□□ 0.83
SNX27-204ENST00000458013 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 SNTG2Q9NY99 539 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 MAP10Q9P2G4 905 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 AP4E1Q9UPM8 1137 aa20.24■□□□□ 0.83
SNX27-204ENST00000458013 CRB1P82279 1406 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 PDE5AO76074 875 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 CCNG1P51959 295 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 CSTF3Q12996 717 aaKnown RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 MTFR1Q15390 333 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 KLHL4Q9C0H6 718 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 MGAT4DA6NG13 374 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 SDR42E2A6NKP2 422 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 PDZK1P1A8MUH7 402 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 HNRNPRO43390 633 aaKnown RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 GARTP22102 1010 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 HUNKP57058 714 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 DOK6Q6PKX4 331 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 ZCCHC23Q6ZST2 131 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 ATG16L2Q8NAA4 619 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 GPAMQ9HCL2 828 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 KLHL1Q9NR64 748 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 PAPOLBQ9NRJ5 636 aaKnown RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 SPAG6O75602 509 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 PSMB9P28065 219 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 SCNN1BP51168 640 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 AKIRIN2Q53H80 203 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 OTUD3Q5T2D3 398 aaPredicted RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 ANKS6Q68DC2 871 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 RIBC1Q8N443 379 aaPredicted RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 DDHD1Q8NEL9 900 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 ATXN3LQ9H3M9 355 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 ARHGEF3Q9NR81 526 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 JCHAINP01591 159 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 RRM1P23921 792 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 TRIM8Q9BZR9 551 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 DYRK1BQ9Y463 629 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 MYL4P12829 197 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 COX10Q12887 443 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNX27-204ENST00000458013 LRRN4Q8WUT4 740 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 OPTNQ96CV9 577 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 MAP3K14Q99558 947 aa20.23■□□□□ 0.83
SNX27-204ENST00000458013 SPRTNQ9H040 489 aaPredicted RBP20.23■□□□□ 0.83
SNX27-204ENST00000458013 CXCL8P10145 99 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CYP2F1P24903 491 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CTXN3Q4LDR2 81 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 ZNF571Q7Z3V5 609 aaPredicted RBP20.22■□□□□ 0.83
SNX27-204ENST00000458013 CIPCQ9C0C6 399 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 C6orf62Q9GZU0 229 aaPredicted RBP20.22■□□□□ 0.83
SNX27-204ENST00000458013 VTA1Q9NP79 307 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 KLHL20Q9Y2M5 609 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 ABCC3O15438 1527 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 ZSCAN5CA6NGD5 496 aaPredicted RBP20.22■□□□□ 0.83
SNX27-204ENST00000458013 MOXD2PA6NHM9 499 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 PEX1O43933 1283 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 NPTX2P47972 431 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CRYMQ14894 314 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CCDC149Q6ZUS6 474 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 DEFB107AQ8IZN7 70 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 SERAC1Q96JX3 654 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 MCM8Q9UJA3 840 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 SLC9A8Q9Y2E8 581 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 FDX1P10109 184 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 ADRA2BP18089 450 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 SLC1A6P48664 564 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CCT8P50990 548 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CHRNB3Q05901 458 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 TRIM32Q13049 653 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 H3BQF6 201 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 PCDH8O95206 1070 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms