RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ATXN1LP0C7T5 689 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ARSAP15289 507 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 GNSP15586 552 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 GCFC2P16383 781 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CR2P20023 1033 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CYP3A5P20815 502 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 GABRR2P28476 465 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 YWHABP31946 246 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ACTN2P35609 894 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 BRCC3P46736 316 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ALDH1A3P47895 512 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IRX6P78412 446 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 GRIK2Q13002 908 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MTF1Q14872 753 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TBC1D25Q3MII6 688 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 WDR45BQ5MNZ6 344 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 STXBP5Q5T5C0 1151 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PLA2G4FQ68DD2 849 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PPP4R3AQ6IN85 833 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ANO7Q6IWH7 933 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 APOA5Q6Q788 366 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF765Q7L2R6 523 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TMEM150AQ86TG1 271 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ERICH1Q86X53 443 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SLC41A1Q8IVJ1 513 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SPACA3Q8IXA5 215 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC148Q8NFR7 591 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 RIN3Q8TB24 985 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 RABGGTAQ92696 567 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TRMT2BQ96GJ1 504 aaKnown RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 MYRFLQ96LU7 910 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 DMRTB1Q96MA1 342 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ADPGKQ9BRR6 497 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 CEP41Q9BYV8 373 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 IL25Q9H293 177 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 ATXN3LQ9H3M9 355 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SLITRK6Q9H5Y7 841 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 PTPRHQ9HD43 1115 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TDP1Q9NUW8 608 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 WRAP73Q9P2S5 460 aaPredicted RBP2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TNFSF13BQ9Y275 285 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 TAF6LQ9Y6J9 622 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 SDK1Q7Z5N4 2213 aa2.3□□□□□ -2.04
NEDD1-204ENST00000457368 AKAP13Q12802 2813 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 FRYLO94915 3013 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 FAM95CA0A1B0GW59 222 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ANKRD33BA6NCL7 494 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 CYP26A1O43174 497 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 PRPF3O43395 683 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 SLC28A2O43868 658 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 DFNA5O60443 496 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 NOL4O94818 638 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 FAM13AO94988 1023 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 NFATC1O95644 943 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 DLGAP3O95886 979 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 RECKO95980 971 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 CYP11A1P05108 521 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 HMGA1P17096 107 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 GRK6P43250 576 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF132P52740 706 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 TMPRSS3P57727 454 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 BNC1Q01954 994 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 SOX4Q06945 474 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 VEPH1Q14D04 833 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 INAVAQ3KP66 663 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 SYCP2LQ5T4T6 812 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 GALNT17Q6IS24 598 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 FBXL19Q6PCT2 694 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ZDHHC13Q8IUH4 622 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ZBTB8OSQ8IWT0 167 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 FBXL16Q8N461 479 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF513Q8N8E2 541 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 IL17RCQ8NAC3 791 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 MCPH1Q8NEM0 835 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 RUFY2Q8WXA3 655 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 PMEPA1Q969W9 287 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 MYO19Q96H55 970 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ZNF578Q96N58 590 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 GCNAQ96QF7 691 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 NAP1L4Q99733 375 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 HSD17B14Q9BPX1 270 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 GTPBP2Q9BX10 602 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 DPH1Q9BZG8 443 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 TPSD1Q9BZJ3 242 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 CXCL16Q9H2A7 254 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 EBF3Q9H4W6 596 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 PRDM16Q9HAZ2 1276 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 TOPORSQ9NS56 1045 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 TM7SF3Q9NS93 570 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 STARD5Q9NSY2 213 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 GCNT4Q9P109 453 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 ARHGAP26Q9UNA1 814 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 TDRD15B5MCY1 1934 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 USP9XQ93008 2570 aaPredicted RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 DSPP15924 2871 aaKnown RBP2.29□□□□□ -2.04
NEDD1-204ENST00000457368 PTPRBP23467 1997 aa2.29□□□□□ -2.04
NEDD1-204ENST00000457368 CCDC196A0A1B0GTZ2 297 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms