RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IDUAP35475 653 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 HNF1BP35680 557 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SLC16A2P36021 539 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 USP14P54578 494 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 B2MP61769 119 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 OLR1P78380 273 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SPAG1Q07617 926 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 GALNT1Q10472 559 aaPredicted RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 TFCP2Q12800 502 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TRPC3Q13507 836 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SART3Q15020 963 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 MAPKAPK3Q16644 382 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 ARL13BQ3SXY8 428 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 FBXO48Q5FWF7 155 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TMEM154Q6P9G4 183 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 ZNF600Q6ZNG1 722 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 CHST15Q7LFX5 561 aaPredicted RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 GPR155Q7Z3F1 870 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 NANOGNBQ7Z5D8 188 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 LUZP1Q86V48 1076 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 PALM2Q8IXS6 379 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 PPIL6Q8IXY8 311 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 PPM1KQ8N3J5 372 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 CPA6Q8N4T0 437 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 RNF10Q8N5U6 811 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 ANKRD52Q8NB46 1076 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SLC4A11Q8NBS3 891 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 RCBTB1Q8NDN9 531 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SMARCE1Q969G3 411 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 EXOC4Q96A65 974 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 MIEF2Q96C03 454 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TOE1Q96GM8 510 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 CHAMP1Q96JM3 812 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 AIFM3Q96NN9 605 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 CLIC6Q96NY7 704 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 YME1L1Q96TA2 773 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 AGXT2Q9BYV1 514 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TM9SF3Q9HD45 589 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 WASH6PQ9NQA3 447 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 IARS2Q9NSE4 1012 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 NMRK1Q9NWW6 199 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 VPS18Q9P253 973 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SRP68Q9UHB9 627 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SATB2Q9UPW6 733 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 SESN1Q9Y6P5 492 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 RGPD1P0DJD0 1748 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TNS1Q9HBL0 1735 aaKnown RBP5.73□□□□□ -1.49
VPS41-209ENST00000457055 MST1RQ04912 1400 aa5.73□□□□□ -1.49
VPS41-209ENST00000457055 TRAV6A0A075B6T7 132 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 A0A1W2PPH5 198 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CTAGE15A4D2H0 777 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ENO4A6NNW6 628 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 B2RBV5 119 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 H7BY64 318 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 E2F3O00716 465 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 MAGEB3O15480 346 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 PRPSAP2O60256 369 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SMPD2O60906 423 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 KERAO60938 352 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SEC22BO75396 215 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FSBPO95073 299 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FSHBP01225 129 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 LTFP02788 710 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SCG5P05408 212 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CLTBP09497 229 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 SNRPA1P09661 255 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 LTA4HP09960 611 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 FAM153BP0C7A2 387 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 POLR2MP0CAP2 368 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 DHRS4L1P0CG22 281 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CTAGE8P0CG41 777 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 ACTN1P12814 892 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 RFC4P35249 363 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 LONP1P36776 959 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 IL6STP40189 918 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 HNMTP50135 292 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 GPC3P51654 580 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 HADHBP55084 474 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 DSTNP60981 165 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CETN1Q12798 172 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 BLMHQ13867 455 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 DHX34Q14147 1143 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 KRT32Q14532 448 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 PRSS53Q2L4Q9 553 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TRIM71Q2Q1W2 868 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 CCDC57Q2TAC2 916 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 Q4G0T1 1027 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 TCTE1Q5JU00 501 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 STEAP3Q658P3 488 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 RPUSD3Q6P087 351 aaKnown RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 NCCRP1Q6ZVX7 275 aaPredicted RBP5.72□□□□□ -1.49
VPS41-209ENST00000457055 CTAGE6Q86UF2 777 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 HEATR4Q86WZ0 1026 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CEP97Q8IW35 865 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 CTAGE4Q8IX94 777 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 FAM178BQ8IXR5 827 aa5.72□□□□□ -1.49
VPS41-209ENST00000457055 AHI1Q8N157 1196 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms