RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TK2O00142 265 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 PIK3R2O00459 728 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 COCHO43405 550 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 TBX18O95935 607 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 LCP1P13796 627 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 AVPR1AP37288 418 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 ACADSBP45954 432 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 TUBP50607 506 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 PDE6CP51160 858 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 DAOAP59103 153 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 SLC7A9P82251 487 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 FMO1Q01740 532 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CDR2Q01850 454 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 ADIGQ0VDE8 80 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
ATG4A-206ENST00000457035 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 DMRTA1Q5VZB9 504 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 VITQ6UXI7 678 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 ZNF677Q86XU0 584 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 PASD1Q8IV76 773 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 SCUBE3Q8IX30 993 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CELF5Q8N6W0 485 aaKnown RBP10.56□□□□□ -0.72
ATG4A-206ENST00000457035 SLC20A1Q8WUM9 679 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CPXM1Q96SM3 734 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CCSER2Q9H7U1 834 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 TRPC7Q9HCX4 862 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 TJP2Q9UDY2 1190 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 CAPN11Q9UMQ6 739 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 SORCS3Q9UPU3 1222 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 ITIH6Q6UXX5 1313 aa10.56□□□□□ -0.72
ATG4A-206ENST00000457035 A0A1W2PQJ5 194 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 YJEFN3A6XGL0 299 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 E5RJQ4 531 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 E7ENQ6 273 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PAPSS1O43252 624 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-206ENST00000457035 NARSO43776 548 aaKnown RBP10.55□□□□□ -0.72
ATG4A-206ENST00000457035 TLR5O60602 858 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 FBXO21O94952 628 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 CYP1A1P04798 512 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-206ENST00000457035 TPM3P06753 285 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 RARGP13631 454 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 TCF3P15923 654 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 FERP16591 822 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PSMC3P17980 439 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 MRE11P49959 708 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 GPC5P78333 572 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 ZXDAP98168 799 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 NHLH1Q02575 133 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 ARID5AQ03989 594 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 FCHO2Q0JRZ9 810 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PDCLQ13371 301 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-206ENST00000457035 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 ADGRD1Q6QNK2 874 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 VSTM4Q8IW00 320 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 SIX6OS1Q8N1H7 587 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 TMEM35BQ8NCS4 154 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 C1orf131Q8NDD1 294 aaKnown RBP10.55□□□□□ -0.72
ATG4A-206ENST00000457035 OLIG1Q8TAK6 271 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 RIN3Q8TB24 985 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 CLEC4CQ8WTT0 213 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 CPLX3Q8WVH0 158 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 IRGQQ8WZA9 623 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PPP1R13BQ96KQ4 1090 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PCDHB18PQ96TA0 734 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 SYT11Q9BT88 431 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 ST7Q9NRC1 585 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 NAGPAQ9UK23 515 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 NUDT5Q9UKK9 219 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 ARHGAP26Q9UNA1 814 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 WDFY4Q6ZS81 3184 aa10.55□□□□□ -0.72
ATG4A-206ENST00000457035 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 GYPCP04921 128 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 FYNP06241 537 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 CKMP06732 381 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 RALAP11233 206 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 ATP5C1P36542 298 aaKnown RBP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 PRKCIP41743 596 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 GABRB2P47870 512 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 YWHAGP61981 247 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATG4A-206ENST00000457035 NOMO3P69849 1222 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 ZBED6P86452 979 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 GRM2Q14416 872 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 PTPN20Q4JDL3 420 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 SFMBT2Q5VUG0 894 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 FMNL3Q8IVF7 1028 aa10.54□□□□□ -0.72
ATG4A-206ENST00000457035 UBALD2Q8IYN6 164 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms