RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 KLHL23Q8NBE8 558 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 DCUN1D1Q96GG9 259 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SEC31BQ9NQW1 1179 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 FRMPD4Q14CM0 1322 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PNPLA6Q8IY17 1366 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 HACD1B0YJ81 288 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NMT1P30419 496 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 AIF1P55008 147 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PLCL1Q15111 1095 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 GPALPP1Q8IXQ4 340 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NKX2-3Q8TAU0 364 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PTCD2Q8WV60 388 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 FAM149B1Q96BN6 582 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TEX13BQ9BXU2 312 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 EURLQ9NYK6 297 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NRXN1Q9ULB1 1477 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ARIH1Q9Y4X5 557 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MYO5AQ9Y4I1 1855 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TPBGLP0DKB5 382 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 GNA15P30679 374 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ZMYND11Q15326 602 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 LRRC74BQ6ZQY2 392 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SLC26A11Q86WA9 606 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SFR1Q86XK3 245 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ZDHHC13Q8IUH4 622 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF248Q8NDW4 579 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 URGCPQ8TCY9 931 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ATL1Q8WXF7 558 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 RHBDF1Q96CC6 855 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TRIM2Q9C040 744 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 FANCFQ9NPI8 374 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TCF7L2Q9NQB0 619 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PTTG2Q9NZH5 202 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TMEM2Q9UHN6 1383 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PJA2O43164 708 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 BMP3P12645 472 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF24P17028 368 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 FXR2P51116 673 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CASP5P51878 434 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MTTPP55157 894 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 DLGAP5Q15398 846 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SP110Q9HB58 689 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF804BA4D1E1 1349 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CPA1P15085 419 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PAICSP22234 425 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 C4orf50Q6ZRC1 276 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ATPAF2Q8N5M1 289 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TJP2Q9UDY2 1190 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 WDR81Q562E7 1941 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 EXTL3O43909 919 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ATP9AO75110 1047 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TOP3BO95985 862 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ITGAVP06756 1048 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 VAMP7P51809 220 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 C2orf54Q08AI8 447 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 DLG1Q12959 904 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 DCAF4L1Q3SXM0 396 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 COMMD9Q9P000 198 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 A0A0X1KG70 313 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PSMD12O00232 456 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 VPS26AO75436 327 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ARSEP51690 589 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PTK7Q13308 1070 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TMEM63BQ5T3F8 832 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ANGPTL8Q6UXH0 198 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 LPCAT2Q7L5N7 544 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TRPV1Q8NER1 839 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HAVCR2Q8TDQ0 301 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CYGBQ8WWM9 190 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 KCTD5Q9NXV2 234 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ASTN2O75129 1339 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CFLARO15519 480 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ALADP13716 330 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PRDX6P30041 224 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PDIA2Q13087 525 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TDGQ13569 410 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SLC15A2Q16348 729 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ANO7Q6IWH7 933 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PIWIL4Q7Z3Z4 852 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 LENG1Q96BZ8 264 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ARHGAP28Q9P2N2 729 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SEPT9Q9UHD8 586 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ANK1P16157 1881 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 C2orf81A6NN90 581 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 M0QX08 132 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CDH3P22223 829 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 VBP1P61758 197 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ITKQ08881 620 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ACTRT2Q8TDY3 377 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 NR4A3Q92570 626 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MPP4Q96JB8 637 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 BTBD10Q9BSF8 475 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HTATIP2Q9BUP3 242 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CYP3A43Q9HB55 503 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 LNPEPQ9UIQ6 1025 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ST14Q9Y5Y6 855 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MDC1Q14676 2089 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ZBTB39O15060 712 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms