RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 RAPGEF5Q92565 580 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 RNF25Q96BH1 459 aaPredicted RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 RBM41Q96IZ5 413 aaKnown RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 HERPUD2Q9BSE4 406 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 TCRBV7S2A1N4TA0A589 114 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 LRRD1A4D1F6 860 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 RARAP10276 462 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 NCAM1P13591 858 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 USP46P62068 366 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 BSPRYQ5W0U4 402 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 SCYL2Q6P3W7 929 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 DENND5BQ6ZUT9 1274 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 BNIPLQ7Z465 357 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 EDEM1Q92611 657 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 SLITRK1Q96PX8 696 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 AFF4Q9UHB7 1163 aaKnown RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 GBF1Q92538 1859 aa17.46■□□□□ 0.38
PDXDC1-204ENST00000455313 ABLIM3O94929 683 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 RALAP11233 206 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 ATF6P18850 670 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 CTNNB1P35222 781 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 MAGEA10P43363 369 aaPredicted RBP17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 ODF2Q5BJF6 829 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 MFSD7Q6UXD7 560 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 RCOR2Q8IZ40 523 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 ZDHHC14Q8IZN3 488 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 HSPH1Q92598 858 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 SPATA17Q96L03 361 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 CTSAP10619 480 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 ATF2P15336 505 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 YWHAGP61981 247 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 RPL10AP62906 217 aaKnown RBP17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 TPGS2Q68CL5 300 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 GPR65Q8IYL9 337 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 MMGT1Q8N4V1 131 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 GPR161Q8N6U8 529 aaKnown RBP17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 OSBPL8Q9BZF1 889 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 FBXO44Q9H4M3 255 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 SCML2Q9UQR0 700 aa17.45■□□□□ 0.38
PDXDC1-204ENST00000455313 C3orf70A6NLC5 250 aaPredicted RBP17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 M0QYT0 321 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 LILRB3O75022 631 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 ENDOD1O94919 500 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 BMPR1AP36894 532 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 PGFP49763 221 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 TUBB4BP68371 445 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 RAB33AQ14088 237 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 FAM109BQ6ICB4 259 aaPredicted RBP17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 SPOCD1Q6ZMY3 1216 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 CMASQ8NFW8 434 aaPredicted RBP17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 SLC7A14Q8TBB6 771 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 ADAM32Q8TC27 787 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 TRIM62Q9BVG3 475 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
PDXDC1-204ENST00000455313 FAM92AA1XBS5 289 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 CCDC188H7C350 402 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 FSCN2O14926 492 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 TEX28O15482 410 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SEC24AO95486 1093 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 RHOXF2BP0C7M4 288 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 CDKN2BP42772 138 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 KLF1Q13351 362 aaPredicted RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 MTMR3Q13615 1198 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 BEND5Q7L4P6 421 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SCD5Q86SK9 330 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 FAM131BQ86XD5 332 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 RHOXF2Q9BQY4 288 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 HEMGNQ9BXL5 484 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 NMUR1Q9HB89 426 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 FNIP2Q9P278 1114 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SYNJ2BP-COX16A0A087WUM0 186 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 GOLGA6L10A0A0M3HER8 536 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 MDM4O15151 490 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 RTN3O95197 1032 aaPredicted RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 CD48P09326 243 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 MYOGP15173 224 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 KDELR1P24390 212 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 RDXP35241 583 aaKnown RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 CETN2P41208 172 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 TUFMP49411 452 aaKnown RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 COPS2P61201 443 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 NME3Q13232 169 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SHHQ15465 462 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 SIX1Q15475 284 aaPredicted RBP17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 BOLA3Q53S33 107 aa17.43■□□□□ 0.38
PDXDC1-204ENST00000455313 TFDP3Q5H9I0 405 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms