RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 XPO6Q96QU8 1125 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 C7orf25Q9BPX7 421 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 MED10Q9BTT4 135 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 SCNM1Q9BWG6 230 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 B3GNT5Q9BYG0 378 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 FGFBP2Q9BYJ0 223 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM124BQ9H5Z6 455 aaPredicted RBP8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 SPHK2Q9NRA0 654 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 WDR35Q9P2L0 1181 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 SUSD2Q9UGT4 822 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 LSM7Q9UK45 103 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 PILRBQ9UKJ0 227 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 WASF3Q9UPY6 502 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 STARD13Q9Y3M8 1113 aa8.5□□□□□ -1.05
NIF3L1-209ENST00000454952 CACNA1EQ15878 2313 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 A0A087X0B3 334 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 PVALEFA0A1B0GWK0 134 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 A0A1W2PQD8 194 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SPTLC2O15270 562 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 EXOC3O60645 756 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 ADAM23O75077 832 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 CST3P01034 146 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 RPN1P04843 607 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 HOXB2P14652 356 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 GNSP15586 552 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 HOXD13P35453 343 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 PTGER3P43115 390 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SLC5A3P53794 718 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 MYL6P60660 151 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SEMA3BQ13214 749 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SLC14A1Q13336 389 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 BIRC3Q13489 604 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 BMT2Q1RMZ1 405 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 C10orf76Q5T2E6 689 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SYCP2LQ5T4T6 812 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SCARA3Q6AZY7 606 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 UNC13DQ70J99 1090 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 ARMCX6Q7L4S7 300 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 TADA2BQ86TJ2 420 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM35AQ86V20 835 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 C12orf40Q86WS4 652 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 PHTF2Q8N3S3 785 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 SCFD1Q8WVM8 642 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 RLN3Q8WXF3 142 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 ZCCHC14Q8WYQ9 949 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 TAF4BQ92750 862 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 DHX58Q96C10 678 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 USP28Q96RU2 1077 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 XYLT2Q9H1B5 865 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 DPEP3Q9H4B8 488 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 IL37Q9NZH6 218 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 MBD1Q9UIS9 605 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 MSRB2Q9Y3D2 182 aa8.49□□□□□ -1.05
NIF3L1-209ENST00000454952 GFRA2O00451 464 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CLDN5O00501 218 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 NPC1O15118 1278 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 TGFB1I1O43294 461 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 STX6O43752 255 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CACNG3O60359 315 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 TLR5O60602 858 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CUTAO60888 179 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 NDUFS2O75306 463 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 AP1G2O75843 785 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 YEATS4O95619 227 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZDHHC11BP0C7U3 371 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 HNRNPLP14866 589 aaKnown RBP eCLIP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 GABRG2P18507 467 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ITPKAP23677 461 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ATP5C1P36542 298 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF132P52740 706 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CACNA2D1P54289 1103 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 SIM1P81133 766 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 NCOA4Q13772 614 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 KNOP1Q1ED39 458 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 SGSM1Q2NKQ1 1148 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 WDR45BQ5MNZ6 344 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 EMC10Q5UCC4 262 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 FAM173BQ6P4H8 233 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 KLHDC10Q6PID8 442 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 HTR3DQ70Z44 454 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 PIP4P1Q86T03 277 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 UNC93AQ86WB7 457 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 BBS7Q8IWZ6 715 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 NELFCDQ8IXH7 590 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CHPFQ8IZ52 775 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 LINC00301Q8NCQ3 95 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 GATA6Q92908 595 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 HPS3Q969F9 1004 aa8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-209ENST00000454952 CDK5RAP1Q96SZ6 601 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms