RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 UBA3Q8TBC4 463 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.33
ECHDC1-209ENST00000454591 SCN1AP35498 2009 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 LPXNO60711 386 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 PTPN4P29074 926 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 BCAR1P56945 870 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 IRF5Q13568 498 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 KRT81Q14533 505 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 C15orf59Q2T9L4 293 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 KBTBD12Q3ZCT8 623 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 CMPK2Q5EBM0 449 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 PPP1R26Q5T8A7 1209 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SH3PXD2AQ5TCZ1 1133 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 LGSNQ5TDP6 509 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 TIFABQ6ZNK6 161 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 CAND1Q86VP6 1230 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 CRYBG2Q8N1P7 616 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 MAB21L3Q8N8X9 362 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 FAM172AQ8WUF8 416 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 CPB2Q96IY4 423 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 PIWIL1Q96J94 861 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SERAC1Q96JX3 654 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SNX27Q96L92 541 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 PLAC1Q9HBJ0 212 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 AKT3Q9Y243 479 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
ECHDC1-209ENST00000454591 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.338e-6■■■■■ 107
ECHDC1-209ENST00000454591 FAM159BA6NKW6 160 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 HACD1B0YJ81 288 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 STRNO43815 780 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 GABBR2O75899 941 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 KRT37O76014 449 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 ZBED1O96006 694 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 FAM163BP0C2L3 166 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 MLNP12872 115 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 CNTFP26441 200 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 ELF1P32519 619 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 ACADSBP45954 432 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 SERPINB9P50453 376 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 HDAC4P56524 1084 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 SLC8A3P57103 927 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 CCNA1P78396 465 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 CDK16Q00536 496 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 FAAP100Q0VG06 881 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 SEMA5AQ13591 1074 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 KRT72Q14CN4 511 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 SEPT7Q16181 437 aaKnown RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 MARCH8Q5T0T0 291 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 STXBP5Q5T5C0 1151 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 STEAP4Q687X5 459 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 CLNKQ7Z7G1 428 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 LRRC6Q86X45 466 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 KIF2BQ8N4N8 673 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 SKA1Q96BD8 255 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 CDCA5Q96FF9 252 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 KIF12Q96FN5 646 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.333e-7■■■■□ 24.7
ECHDC1-209ENST00000454591 TSSK1BQ9BXA7 367 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 NRDE2Q9H7Z3 1164 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 XAB2Q9HCS7 855 aaKnown RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 RAB6BQ9NRW1 208 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
ECHDC1-209ENST00000454591 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 TRIM33Q9UPN9 1127 aa13□□□□□ -0.33
ECHDC1-209ENST00000454591 RRN3P2A6NIE6 340 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 SLC15A5A6NIM6 579 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 KCNN4O15554 427 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 APOEP02649 317 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 VTNP04004 478 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 RBL1P28749 1068 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 AXLP30530 894 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 L1CAMP32004 1257 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 NAB1Q13506 487 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 RAB6CQ53S08 254 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 STRADAQ7RTN6 431 aa12.99□□□□□ -0.33
ECHDC1-209ENST00000454591 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms