RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 SUN1O94901 812 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 AKAP5P24588 427 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 BCAR1P56945 870 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 SOX4Q06945 474 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 HP1BP3Q5SSJ5 553 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 C3orf62Q6ZUJ4 267 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 PSTKQ8IV42 348 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 MCUQ8NE86 351 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 SMC6Q96SB8 1091 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 HNRNPABQ99729 332 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 KATNAL1Q9BW62 490 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 PIN4Q9Y237 131 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 GINS2Q9Y248 185 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 COL4A4P53420 1690 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 XPO1O14980 1071 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 ZFXP17010 805 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 LMO2P25791 158 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 NR2C2P49116 596 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 SPARCL1Q14515 664 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 ZC3H18Q86VM9 953 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 IGDCC3Q8IVU1 814 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 C7orf31Q8N865 590 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 FBF1Q8TES7 1133 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 NT5C3BQ969T7 300 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 ALKBH8Q96BT7 664 aaKnown RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 PAFAH2Q99487 392 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 LPIN3Q9BQK8 851 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 GPATCH2LQ9NWQ4 482 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 RCOR3Q9P2K3 495 aaPredicted RBP18.91■□□□□ 0.62
MECP2-205ENST00000453960 CPA4Q9UI42 421 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 ARL2BPQ9Y2Y0 163 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 IPPQ9Y573 584 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 USP3Q9Y6I4 520 aa18.91■□□□□ 0.62
MECP2-205ENST00000453960 H7C0C1 242 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 HCRTO43612 131 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 GCATO75600 419 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 CELF2O95319 508 aaKnown RBP18.9■□□□□ 0.62
MECP2-205ENST00000453960 CCDC130P13994 396 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
MECP2-205ENST00000453960 MAGEA3P43357 314 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 ATP5OP48047 213 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 PDK4Q16654 411 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 APPL2Q8NEU8 664 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.9■□□□□ 0.62
MECP2-205ENST00000453960 STARD13Q9Y3M8 1113 aa18.9■□□□□ 0.62
MECP2-205ENST00000453960 GABRDO14764 452 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 ATP2A2P16615 1042 aaKnown RBP18.89■□□□□ 0.61
MECP2-205ENST00000453960 KRT15P19012 456 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 CYP2F1P24903 491 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 NRLP54845 237 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 LILRA4P59901 499 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 BASP1P80723 227 aaKnown RBP18.89■□□□□ 0.61
MECP2-205ENST00000453960 BBS9Q3SYG4 887 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 EFHC1Q5JVL4 640 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 FBXW10Q5XX13 1052 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 SCYL2Q6P3W7 929 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 C17orf99Q6UX52 265 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 OSTM1Q86WC4 334 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.61
MECP2-205ENST00000453960 AGGF1Q8N302 714 aaeCLIP18.89■□□□□ 0.616e-13■□□□□ 8.6
MECP2-205ENST00000453960 GBP7Q8N8V2 638 aaPredicted RBP18.89■□□□□ 0.61
MECP2-205ENST00000453960 ARRDC4Q8NCT1 418 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 GDAP1Q8TB36 358 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 CLEC4CQ8WTT0 213 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 SLC44A1Q8WWI5 657 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 LRRC39Q96DD0 335 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 TNIP3Q96KP6 325 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 PPP1R10Q96QC0 940 aaKnown RBP18.89■□□□□ 0.61
MECP2-205ENST00000453960 CYTH2Q99418 400 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 MLXIPLQ9NP71 852 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 HAUS2Q9NVX0 235 aa18.89■□□□□ 0.61
MECP2-205ENST00000453960 A0A1W2PPM1 405 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 IGF2BP3O00425 579 aaKnown RBP eCLIP18.88■□□□□ 0.61
MECP2-205ENST00000453960 PTGESO14684 152 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 ZWINTO95229 277 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 GSTA2P09210 222 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 RBL1P28749 1068 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 ELK3P41970 407 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 ADCY1Q08828 1119 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 SLC45A4Q5BKX6 768 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 SH2D5Q6ZV89 423 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 SUGP1Q8IWZ8 645 aaKnown RBP18.88■□□□□ 0.61
MECP2-205ENST00000453960 PALM2Q8IXS6 379 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 LENG1Q96BZ8 264 aaPredicted RBP18.88■□□□□ 0.61
MECP2-205ENST00000453960 SNX25Q9H3E2 840 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.88■□□□□ 0.61
MECP2-205ENST00000453960 GRID1Q9ULK0 1009 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 C17orf102A2RUQ5 167 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 KCNN4O15554 427 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 SPAG7O75391 227 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 ZBED1O96006 694 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 GNAT1P11488 350 aa18.88■□□□□ 0.61
MECP2-205ENST00000453960 TPSB2P20231 275 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms