RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HESX1Q9UBX0 185 aa15.32■□□□□ 0.04
HSPG2-207ENST00000453796 NAGPAQ9UK23 515 aa15.32■□□□□ 0.04
HSPG2-207ENST00000453796 NUDT5Q9UKK9 219 aa15.32■□□□□ 0.04
HSPG2-207ENST00000453796 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.32■□□□□ 0.04
HSPG2-207ENST00000453796 SH3BP1Q9Y3L3 701 aa15.32■□□□□ 0.04
HSPG2-207ENST00000453796 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
HSPG2-207ENST00000453796 RNF40O75150 1001 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 GABBR2O75899 941 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 CALCAP01258 141 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
HSPG2-207ENST00000453796 SETSIPP0DME0 302 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 IRF1P10914 325 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 HOXA6P31267 233 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 EIF2DP41214 584 aaKnown RBP15.31■□□□□ 0.04
HSPG2-207ENST00000453796 TKTL1P51854 596 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 NRLP54845 237 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 SLC8A3P57103 927 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 DMWDQ09019 674 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 PPP2R5DQ14738 602 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 CNGA2Q16280 664 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 LY6G5CQ5SRR4 150 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 TRIM65Q6PJ69 517 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 C12orf40Q86WS4 652 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 SCML4Q8N228 414 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 SLC35F5Q8WV83 523 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 EXOC4Q96A65 974 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 ULBP1Q9BZM6 244 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 NACA2Q9H009 215 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 DNMT3LQ9UJW3 386 aa15.31■□□□□ 0.04
HSPG2-207ENST00000453796 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
HSPG2-207ENST00000453796 K7EQS6 105 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 ZBED1O96006 694 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 CHRM1P11229 460 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-207ENST00000453796 RALAP11233 206 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 ADH5P11766 374 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 SLC9A1P19634 815 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 BRD2P25440 801 aaKnown RBP15.3■□□□□ 0.04
HSPG2-207ENST00000453796 STILQ15468 1287 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 Q6ZNB5 142 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 PHTF2Q8N3S3 785 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 CRACR2AQ9BSW2 395 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
HSPG2-207ENST00000453796 SPHK2Q9NRA0 654 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 DACH1Q9UI36 760 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 FRYLO94915 3013 aa15.3■□□□□ 0.04
HSPG2-207ENST00000453796 PTPRZ1P23471 2315 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 A0A0A0MRY4 1105 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ANTXRLA6NF34 631 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 HOXC11O43248 304 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 STC2O76061 302 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ADH1CP00326 375 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 SLC6A11P48066 632 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 YWHAGP61981 247 aaKnown RBP eCLIP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 APBA1Q02410 837 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ADIGQ0VDE8 80 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 MIIPQ5JXC2 388 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 PMF1Q6P1K2 205 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 GJB7Q6PEY0 223 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 GBP6Q6ZN66 633 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ENOSF1Q7L5Y1 443 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 TADA2BQ86TJ2 420 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 TMEM25Q86YD3 366 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ARHGAP18Q8N392 663 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 RPLP0P6Q8NHW5 317 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 ATRIPQ8WXE1 791 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 NDRG1Q92597 394 aaKnown RBP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 CDK5RAP1Q96SZ6 601 aaKnown RBP15.29■□□□□ 0.04
HSPG2-207ENST00000453796 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
HSPG2-207ENST00000453796 BECN2A8MW95 431 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 M0QYV0 167 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 ATG13O75143 517 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 PON1P27169 355 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
HSPG2-207ENST00000453796 DAOAP59103 153 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 GAD2Q05329 585 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-207ENST00000453796 EXOC3L4Q17RC7 722 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 DPY19L2P1Q6NXN4 242 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 SFTPA1Q8IWL2 248 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 USP33Q8TEY7 942 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 SECISBP2LQ93073 1101 aaKnown RBP15.28■□□□□ 0.04
HSPG2-207ENST00000453796 PNKPQ96T60 521 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 CNGB3Q9NQW8 809 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 POLR3BQ9NW08 1133 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-207ENST00000453796 APEX2Q9UBZ4 518 aa15.28■□□□□ 0.04
HSPG2-207ENST00000453796 LSM7Q9UK45 103 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms