RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 ELSPBP1Q96BH3 223 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 PIWIL1Q96J94 861 aaKnown RBP16.47■□□□□ 0.23
VCX3B-204ENST00000453306 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
VCX3B-204ENST00000453306 ULBP1Q9BZM6 244 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 DNAI2Q9GZS0 605 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 NMUR1Q9HB89 426 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 LTB4R2Q9NPC1 389 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 OSER1Q9NX31 292 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 CHORDC1Q9UHD1 332 aaPredicted RBP16.47■□□□□ 0.23
VCX3B-204ENST00000453306 MAGED2Q9UNF1 606 aaPredicted RBP16.47■□□□□ 0.23
VCX3B-204ENST00000453306 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
VCX3B-204ENST00000453306 E5RJQ4 531 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
VCX3B-204ENST00000453306 USP17L7P0C7H9 530 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 CSH1P0DML2 217 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 CSH2P0DML3 217 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 LCP1P13796 627 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 TNFAIP3P21580 790 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 ANXA13P27216 316 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 TKTL1P51854 596 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 ADIGQ0VDE8 80 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 IFRD2Q12894 506 aaPredicted RBP16.46■□□□□ 0.23
VCX3B-204ENST00000453306 STXBP5Q5T5C0 1151 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 CYP4A22Q5TCH4 519 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 PM20D1Q6GTS8 502 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 PDZD4Q76G19 769 aaPredicted RBP16.46■□□□□ 0.23
VCX3B-204ENST00000453306 SCUBE3Q8IX30 993 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 DNASE1L2Q92874 299 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 TRMT2BQ96GJ1 504 aaKnown RBP16.46■□□□□ 0.23
VCX3B-204ENST00000453306 HSFY1Q96LI6 401 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 CEP295NLQ96MC4 621 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 GMIPQ9P107 970 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 IMPACTQ9P2X3 320 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
VCX3B-204ENST00000453306 ZNF263O14978 683 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 ZDHHC11BP0C7U3 371 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 MYL4P12829 197 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 CDK17Q00537 523 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
VCX3B-204ENST00000453306 TAF5Q15542 800 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 TPRG1Q6ZUI0 275 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 CCDC186Q7Z3E2 898 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PHLDB2Q86SQ0 1253 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 KIAA2013Q8IYS2 634 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 LEMD2Q8NC56 503 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 TMEM35BQ8NCS4 154 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PDLIM2Q96JY6 352 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PPP1R13BQ96KQ4 1090 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 ZSWIM3Q96MP5 696 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PANX2Q96RD6 677 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 MIS12Q9H081 205 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 ZFP14Q9HCL3 533 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 SCML2Q9UQR0 700 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PCDHGA2Q9Y5H1 932 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 PTPRDP23468 1912 aa16.45■□□□□ 0.22
VCX3B-204ENST00000453306 GVINP1Q7Z2Y8 2422 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 A0A1W2PRU2 124 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 ZNF840PA6NDX5 716 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 MAN2B1O00754 1011 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 LSM8O95777 96 aaKnown RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 FYNP06241 537 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 CEBPBP17676 345 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 MMP8P22894 467 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 YWHAQP27348 245 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 GABRR2P28476 465 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 RPS9P46781 194 aaKnown RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 GABRB2P47870 512 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 CENPCQ03188 943 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 CSTF1Q05048 431 aaKnown RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 MTF1Q14872 753 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 VEPH1Q14D04 833 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 TDRD12Q587J7 1177 aaKnown RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 ACAD10Q6JQN1 1059 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 ITIH5Q86UX2 942 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 MAML2Q8IZL2 1156 aaPredicted RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 NHEJ1Q9H9Q4 299 aaPredicted RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
VCX3B-204ENST00000453306 MTF2Q9Y483 593 aaPredicted RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 BZW2Q9Y6E2 419 aaKnown RBP16.44■□□□□ 0.22
VCX3B-204ENST00000453306 CACNA1AO00555 2505 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 A0A1W2PQH9 124 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 TCRBV5S1A1TA0A578 114 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 YJEFN3A6XGL0 299 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 TMCO5BA8MYB1 307 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 E7ENQ6 273 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 ZBED1O96006 694 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 TPM1P09493 284 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 CD72P21854 359 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 DAOAP59103 153 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 CYP4F8P98187 520 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
VCX3B-204ENST00000453306 TEAD2Q15562 447 aa16.43■□□□□ 0.22
VCX3B-204ENST00000453306 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms