RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 OSMRQ99650 979 aa8□□□□□ -1.13
RIF1-206ENST00000453091 SIKE1Q9BRV8 207 aa8□□□□□ -1.13
RIF1-206ENST00000453091 ARL8BQ9NVJ2 186 aa8□□□□□ -1.13
RIF1-206ENST00000453091 NRXN1Q9ULB1 1477 aa8□□□□□ -1.13
RIF1-206ENST00000453091 BAIAP3O94812 1187 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 CLPTM1O96005 669 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PSMC3P17980 439 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PPP3CCP48454 512 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 NFYCQ13952 458 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 LPCAT4Q643R3 524 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 CDRT15Q96T59 188 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PXMP2Q9NR77 195 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 SH3BGRLO75368 114 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 POMCP01189 267 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 STAG3L1P0CL83 205 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 NEK2P51955 445 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PTK2BQ14289 1009 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 OTUD3Q5T2D3 398 aaPredicted RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 ERMARDQ5T6L9 678 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PLEKHA7Q6IQ23 1121 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 APOBEC3HQ6NTF7 200 aaKnown RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 DNAJC19Q96DA6 116 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 MED15Q96RN5 788 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ILKAPQ9H0C8 392 aaPredicted RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 MRPL40Q9NQ50 206 aaKnown RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 FBXO6Q9NRD1 293 aaPredicted RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 PKP3Q9Y446 797 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 NR2E1Q9Y466 385 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 HMGCRP04035 888 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 FAM200BP0CF97 657 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 HSD17B4P51659 736 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 FSTL1Q12841 308 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 SLC44A4Q53GD3 710 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 RNF220Q5VTB9 566 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 C11orf96Q7Z7L8 435 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 MIB1Q86YT6 1006 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ZNF606Q8WXB4 792 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 TNIP3Q96KP6 325 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ZNF560Q96MR9 790 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 THUMPD3Q9BV44 507 aaKnown RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 TBC1D10AQ9BXI6 508 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 COG5Q9UP83 839 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 KCNK1O00180 336 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 TBC1D4O60343 1298 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 KRT33BQ14525 404 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 CCDC92Q53HC0 331 aaPredicted RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 DENND1BQ6P3S1 775 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 IL31RAQ8NI17 732 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 CKAP2Q8WWK9 683 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 SMARCAD1Q9H4L7 1026 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 SLC13A4Q9UKG4 626 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 R3HDM2Q9Y2K5 976 aaKnown RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 ZNF839A8K0R7 811 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 M0R3G1 203 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 TADA2AO75478 443 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 NDUFS3O75489 264 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 LTFP02788 710 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 TNFSF9P41273 254 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PDK1Q15118 436 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 OTOAQ7RTW8 1153 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 VGLL2Q8N8G2 317 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 CATSPER1Q8NEC5 780 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PRPF18Q99633 342 aaKnown RBP7.99□□□□□ -1.13
RIF1-206ENST00000453091 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.99□□□□□ -1.131e-6■□□□□ 10.7
RIF1-206ENST00000453091 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 A8MX80 341 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ERVK-10P10266 1014 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 THPOP40225 353 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 PTK6Q13882 451 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 POU6F1Q14863 301 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 POTEAQ6S8J7 498 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 OTOP1Q7RTM1 612 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ZNF677Q86XU0 584 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 RAET1EQ8TD07 263 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 WDR18Q9BV38 432 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 LATS2Q9NRM7 1088 aa7.99□□□□□ -1.13
RIF1-206ENST00000453091 ERI2A8K979 691 aaKnown RBP7.98□□□□□ -1.13
RIF1-206ENST00000453091 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
RIF1-206ENST00000453091 SP100P23497 879 aaPredicted RBP7.98□□□□□ -1.13
RIF1-206ENST00000453091 KBTBD12Q3ZCT8 623 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 TBCELQ5QJ74 424 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 WASHC2DQ5SRD0 308 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 SPON1Q9HCB6 807 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 HES2Q9Y543 173 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 TSC22D2O75157 780 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 PGM5Q15124 567 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 GNASQ5JWF2 1037 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 DDX53Q86TM3 631 aaKnown RBP7.98□□□□□ -1.13
RIF1-206ENST00000453091 MICU2Q8IYU8 434 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 STKLD1Q8NE28 680 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 GLMNQ92990 594 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 PGM2Q96G03 612 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 PGLYRP2Q96PD5 576 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 P2RX7Q99572 595 aaKnown RBP7.98□□□□□ -1.13
RIF1-206ENST00000453091 KLHL25Q9H0H3 589 aa7.98□□□□□ -1.13
RIF1-206ENST00000453091 CDY2AQ9Y6F7 541 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms