RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CEP44Q9C0F1 390 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 HIPK3Q9H422 1215 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 EHD1Q9H4M9 534 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 BTG4Q9NY30 223 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 KLHL3Q9UH77 587 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 GTF3C4Q9UKN8 822 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ITGA11Q9UKX5 1188 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 PCDHA12Q9UN75 941 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 EXOC7Q9UPT5 735 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 LTBP4Q8N2S1 1624 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CLUHO75153 1309 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 LAMB2P55268 1798 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 DENND3A2RUS2 1198 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 SDR42E2A6NKP2 422 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TNFRSF10AO00220 468 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 EDIL3O43854 480 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ENDOUP21128 410 aaKnown RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 TCEA1P23193 301 aaKnown RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 SSTR1P30872 391 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 SLC12A3P55017 1021 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 PSMC1P62191 440 aaKnown RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 ESRRGP62508 458 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 MORF4L2Q15014 288 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 BMT2Q1RMZ1 405 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ATG16L1Q676U5 607 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 KIF6Q6ZMV9 814 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 DENND5BQ6ZUT9 1274 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CRLF3Q8IUI8 442 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 HAS1Q92839 578 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TAMM41Q96BW9 452 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ERLEC1Q96DZ1 483 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 EBF4Q9BQW3 602 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TRIM56Q9BRZ2 755 aaKnown RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 ACSS3Q9H6R3 686 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 DCP1AQ9NPI6 582 aaPredicted RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 RIMS3Q9UJD0 308 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 PRELID1Q9Y255 219 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 AHDC1Q5TGY3 1603 aaPredicted RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 ASTN2O75129 1339 aaPredicted RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 ESYT2A0FGR8 921 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 KRBA1A5PL33 1030 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ANKRD34BA5PLL1 514 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 CLASP2O75122 1294 aaKnown RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 BANF1O75531 89 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 C8BP07358 591 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 TRIM49P0CI25 452 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 TRIM49CP0CI26 452 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GLRA2P23416 452 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 JAK1P23458 1154 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 RFC4P35249 363 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ARSEP51690 589 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 STAT2P52630 851 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 EVA1CP58658 441 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 NSUN2Q08J23 767 aaKnown RBP eCLIP8.92□□□□□ -0.98
LSM5-208ENST00000450169 GPS1Q13098 491 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 TRIM16LQ309B1 348 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 NPAS4Q8IUM7 802 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 CHERPQ8IWX8 916 aaKnown RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 CPNE9Q8IYJ1 553 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GLIS1Q8NBF1 620 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 HELQQ8TDG4 1101 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 USP33Q8TEY7 942 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 E2F7Q96AV8 911 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 OTUD5Q96G74 571 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 SERAC1Q96JX3 654 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 REEP2Q9BRK0 252 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 MECRQ9BV79 373 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GCOM2Q9BZD3 368 aaPredicted RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 CAAP1Q9H8G2 361 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ANLNQ9NQW6 1124 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GPRC5DQ9NZD1 345 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ERVK-11Q9UQG0 969 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ERGIC3Q9Y282 383 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 MYRFQ9Y2G1 1151 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 RNF11Q9Y3C5 154 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 MYO3BQ8WXR4 1341 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 CACNA1SQ13698 1873 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 H3BNH8 94 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 TMX2-CTNND1H3BSU7 103 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 J3QRK9 145 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 KLHL2O95198 593 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GCNT3O95395 438 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 S100BP04271 92 aaPredicted RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 ZSCAN5DPP0CG00 497 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ITGAXP20702 1163 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ACAT1P24752 427 aaKnown RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 RPA1P27694 616 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 MAPK4P31152 587 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 HSD17B4P51659 736 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 CTBSQ01459 385 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 SF3B4Q15427 424 aaKnown RBP eCLIP8.92□□□□□ -0.981e-6■□□□□ 10.3
LSM5-208ENST00000450169 MOGQ16653 247 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 HIF1AQ16665 826 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms