RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LTBP2Q14767 1821 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 LIASO43766 372 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 CST8O60676 142 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 GAS8O95995 478 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 LTFP02788 710 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 AMHP03971 560 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 RAG1P15918 1043 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 GBP1P32455 592 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 GRIK1P39086 918 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 PBX3P40426 434 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 SULT1E1P49888 294 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 LMNB2Q03252 620 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 DPYSL3Q14195 570 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 HLTFQ14527 1009 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP39-207ENST00000450066 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 TMEM173Q86WV6 379 aaPredicted RBP14.87□□□□□ -0.03
USP39-207ENST00000450066 TMEM199Q8N511 208 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 TTC13Q8NBP0 860 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 FAM71BQ8TC56 605 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 TTPALQ9BTX7 342 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 CWH43Q9H720 699 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 RRN3Q9NYV6 651 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 CALCOCO1Q9P1Z2 691 aa14.87□□□□□ -0.03
USP39-207ENST00000450066 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 H7C4K7 107 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 CAPN9O14815 690 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 EFEMP2O95967 443 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 MAGEA11P43364 429 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TNNT3P45378 269 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 BYSLQ13895 437 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 KRT81Q14533 505 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 PPP1R7Q15435 360 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 OTUD1Q5VV17 481 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 ANKS3Q6ZW76 656 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 BCL7CQ8WUZ0 217 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 B3GALT6Q96L58 329 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TRIM31Q9BZY9 425 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 NAALADL1Q9UQQ1 740 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 PCDHB5Q9Y5E4 795 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TBC1D4O60343 1298 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 RDXP35241 583 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 ATXN1P54253 815 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 KRT17Q04695 432 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 SMARCB1Q12824 385 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TFDP2Q14188 446 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 DPYSL2Q16555 572 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 KCTD19Q17RG1 926 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 ZC3H12AQ5D1E8 599 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 RTP2Q5QGT7 225 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 SND1Q7KZF4 910 aaKnown RBP eCLIP14.86□□□□□ -0.034e-6■■□□□ 12.7
USP39-207ENST00000450066 BEND5Q7L4P6 421 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 NKD2Q969F2 451 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 ZNF689Q96CS4 500 aaPredicted RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 C8orf48Q96LL4 319 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 GDAP1L1Q96MZ0 367 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 FAM118BQ9BPY3 351 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 TRIM62Q9BVG3 475 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 MAK16Q9BXY0 300 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 VIPAS39Q9H9C1 493 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 PCDH18Q9HCL0 1135 aa14.86□□□□□ -0.03
USP39-207ENST00000450066 DRG1Q9Y295 367 aaKnown RBP14.86□□□□□ -0.03
USP39-207ENST00000450066 PATJQ8NI35 1801 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 APOC4-APOC2K7ER74 178 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 M0QYT0 321 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 TRIM66O15016 1216 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 APOC2P02655 101 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 NCAM1P13591 858 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 IL4RP24394 825 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 L1CAMP32004 1257 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SLC5A3P53794 718 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 PTK6Q13882 451 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SCAMP5Q8TAC9 235 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 PGAP3Q96FM1 320 aaPredicted RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 CCDC114Q96M63 670 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 RNF157Q96PX1 679 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 ZNF670Q9BS34 389 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 GPATCH2LQ9NWQ4 482 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 FAM53CQ9NYF3 392 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 FAM153AQ9UHL3 310 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 DNPEPQ9ULA0 475 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 SNX24Q9Y343 169 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 COL4A6Q14031 1691 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 RPL21P46778 160 aaKnown RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 VCPP55072 806 aaKnown RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 WDR5P61964 334 aaKnown RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 DYNLT1P63172 113 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 DEUP1Q05D60 604 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 MMRN1Q13201 1228 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 GPR17Q13304 367 aa14.85□□□□□ -0.03
USP39-207ENST00000450066 OASLQ15646 514 aaKnown RBP14.85□□□□□ -0.03
USP39-207ENST00000450066 CA9Q16790 459 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms