RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
VIPAS39-203ENST00000448935 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 MCF2LO15068 1137 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TRAPPC3O43617 180 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ATP2C2O75185 946 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ZFXP17010 805 aaPredicted RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 NOS2P35228 1153 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 YWHAZP63104 245 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TSPY1Q01534 308 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ADIGQ0VDE8 80 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 NR6A1Q15406 480 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TERF2Q15554 542 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 OASLQ15646 514 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 SLC25A52Q3SY17 297 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 NOMO2Q5JPE7 1267 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ERMARDQ5T6L9 678 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PAQR9Q6ZVX9 377 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TRMT10CQ7L0Y3 403 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PCGF5Q86SE9 256 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 EXOC4Q96A65 974 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 FAM149B1Q96BN6 582 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ACSF2Q96CM8 615 aaPredicted RBP11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PCED1BQ96HM7 432 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 SUSD3Q96L08 255 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PEBP4Q96S96 227 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 ZNF670Q9BS34 389 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 TRIM62Q9BVG3 475 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 PCDH9Q9HC56 1237 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 CRTAC1Q9NQ79 661 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 KRT82Q9NSB4 513 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 RRN3Q9NYV6 651 aa11.02□□□□□ -0.64
VIPAS39-203ENST00000448935 A6NNZ2 444 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 HMGB1P1B2RPK0 211 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 SGK1O00141 431 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 CLDN5O00501 218 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 NUDT17P0C025 328 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 MYZAPP0CAP1 466 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 TGM2P21980 687 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 IVDP26440 423 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 KLRC2P26717 231 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ARSEP51690 589 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ITGA8P53708 1063 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 AIF1P55008 147 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 MAP3K7CLP57077 242 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 OTUD4Q01804 1114 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ADCY2Q08462 1091 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 DPYSL3Q14195 570 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 TAF5Q15542 800 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 UAP1Q16222 522 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 TUBB8Q3ZCM7 444 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 CEP85LQ5SZL2 805 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 DENND2CQ68D51 928 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 OVOS1Q6IE37 1185 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM171BQ6P995 826 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 HOOK3Q86VS8 718 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM126BQ8IXS8 530 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ABI1Q8IZP0 508 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 FAM76AQ8TAV0 307 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 SEPT8Q92599 483 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 P3H4Q92791 437 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 RNF157Q96PX1 679 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 PAAF1Q9BRP4 392 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 POPDC2Q9HBU9 364 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 PNPLA8Q9NP80 782 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 PSD3Q9NYI0 1048 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 CACNG4Q9UBN1 327 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
VIPAS39-203ENST00000448935 MYBPHLA2RUH7 354 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 CFAP69A5D8W1 941 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 BRCC3P46736 316 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 TKTL1P51854 596 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 HDAC4P56524 1084 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 DYNLT1P63172 113 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RNASELQ05823 741 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 DSC1Q08554 894 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 ADCY1Q08828 1119 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 DPYSL2Q16555 572 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 SH3PXD2AQ5TCZ1 1133 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 KIAA0319Q5VV43 1072 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 IZUMO3Q5VZ72 239 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 C4orf50Q6ZRC1 276 aa11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 CYP4V2Q6ZWL3 525 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 RTN4RL1Q86UN2 441 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-203ENST00000448935 DEFB106AQ8N104 65 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms