RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ABCC13Q9NSE7 274 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 GMIPQ9P107 970 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 AMFRQ9UKV5 643 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 NAALADL1Q9UQQ1 740 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 USTQ9Y2C2 406 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 JRKLQ9Y4A0 524 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 HYOU1Q9Y4L1 999 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 CDH23Q9H251 3354 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 TMEM265A0A087WTH1 108 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 A0A1W2PQH9 124 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 DPYSL4O14531 572 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 SPOPO43791 374 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 ZMYND10O75800 440 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 FYNP06241 537 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 CCDC14Q49A88 953 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 SCD5Q86SK9 330 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 NIPA2Q8N8Q9 360 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 DDX23Q9BUQ8 820 aaKnown RBP20.42■□□□□ 0.86
SGCE-207ENST00000447873 STAP1Q9ULZ2 295 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 RNF8O76064 485 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 PTPN9P43378 593 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 PGFP49763 221 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 ATP11AP98196 1134 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 ACAP1Q15027 740 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 CDO1Q16878 200 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 C15orf59Q2T9L4 293 aaPredicted RBP20.42■□□□□ 0.86
SGCE-207ENST00000447873 PRPF38BQ5VTL8 546 aaKnown RBP20.42■□□□□ 0.86
SGCE-207ENST00000447873 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 BEND5Q7L4P6 421 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 NT5DC3Q86UY8 548 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 PDZD8Q8NEN9 1154 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 OVCA2Q8WZ82 227 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 ZNF592Q92610 1267 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 NMUR1Q9HB89 426 aa20.42■□□□□ 0.86
SGCE-207ENST00000447873 UXTQ9UBK9 157 aaPredicted RBP20.42■□□□□ 0.86
SGCE-207ENST00000447873 ENC1O14682 589 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 CCL16O15467 120 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 CASQ1P31415 396 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 SSR1P43307 286 aaKnown RBP20.41■□□□□ 0.86
SGCE-207ENST00000447873 SLC25A52Q3SY17 297 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 PRDM12Q9H4Q4 367 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 NSUN3Q9H649 340 aaKnown RBP20.41■□□□□ 0.86
SGCE-207ENST00000447873 RRN3Q9NYV6 651 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 CLIC5Q9NZA1 410 aa20.41■□□□□ 0.86
SGCE-207ENST00000447873 CTAGE9A4FU28 777 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 RFPL2O75678 378 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 HOXA9P31269 272 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 SULT1E1P49888 294 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 MEI1Q5TIA1 1274 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 DAB2IPQ5VWQ8 1189 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 CC2D1AQ6P1N0 951 aaPredicted RBP20.4■□□□□ 0.86
SGCE-207ENST00000447873 RSRC2Q7L4I2 434 aaKnown RBP20.4■□□□□ 0.86
SGCE-207ENST00000447873 CPNE8Q86YQ8 564 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 RNF139Q8WU17 664 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 FAM172AQ8WUF8 416 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 NPY6RQ99463 290 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 NAPGQ99747 312 aaPredicted RBP20.4■□□□□ 0.86
SGCE-207ENST00000447873 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
SGCE-207ENST00000447873 IGFLR1Q9H665 355 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 OSER1Q9NX31 292 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 TRPM5Q9NZQ8 1165 aa20.4■□□□□ 0.86
SGCE-207ENST00000447873 PACSIN2Q9UNF0 486 aaPredicted RBP20.4■□□□□ 0.86
SGCE-207ENST00000447873 HNRNPA1P09651 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
SGCE-207ENST00000447873 ZDHHC11BP0C7U3 371 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 RALAP11233 206 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 PPP3CCP48454 512 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 DNTTIP2Q5QJE6 756 aaKnown RBP20.39■□□□□ 0.85
SGCE-207ENST00000447873 SH3PXD2AQ5TCZ1 1133 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 NT5C3BQ969T7 300 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 TBCBQ99426 244 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 ZDHHC7Q9NXF8 308 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 LMCD1Q9NZU5 365 aa20.39■□□□□ 0.85
SGCE-207ENST00000447873 M0QYT0 321 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 NCK2O43639 380 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 XYLBO75191 536 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 LRCH4O75427 683 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 RARGP13631 454 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 TFE3P19532 575 aaPredicted RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 GTF2F1P35269 517 aaKnown RBP eCLIP20.38■□□□□ 0.85
SGCE-207ENST00000447873 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 RPS6KA1Q15418 735 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 TCEAL5Q5H9L2 206 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ZNF697Q5TEC3 545 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 UBE2Q2Q8WVN8 375 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 CENPIQ92674 756 aaPredicted RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 NCAPGQ9BPX3 1015 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ASAH2Q9NR71 780 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 SYNJ2BP-COX16A0A087WUM0 186 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ZNF840PA6NDX5 716 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 FANCGO15287 622 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ATP1A1P05023 1023 aaKnown RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 PCK1P35558 622 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 PITX1P78337 314 aaPredicted RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 GRIN2CQ14957 1233 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 PABPC1LQ4VXU2 614 aaKnown RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 SNX30Q5VWJ9 437 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 STRADAQ7RTN6 431 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ARFGAP1Q8N6T3 406 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 KIF18AQ8NI77 898 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms