RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ZRANB2O95218 330 aaKnown RBP eCLIP25.98■■□□□ 1.756e-6■■■■□ 21
RFFL-206ENST00000447669 CA3P07451 260 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 RARAP10276 462 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 PTPN9P43378 593 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 ADCY2Q08462 1091 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 NME3Q13232 169 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 SMC1AQ14683 1233 aaKnown RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 SEL1L2Q5TEA6 688 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 RSRC2Q7L4I2 434 aaKnown RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 ARCQ7LC44 396 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 SLC7A14Q8TBB6 771 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 CENPIQ92674 756 aaPredicted RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 LCMT1Q9UIC8 334 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 TNRC18O15417 2968 aaPredicted RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 A0A1W2PQH9 124 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 M0QYT0 321 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 ABLIM3O94929 683 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 CNPP09543 421 aaKnown RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 KRT10P13645 584 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 NOS2P35228 1153 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 PBX2P40425 430 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 SLC25A52Q3SY17 297 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 MFSD7Q6UXD7 560 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 TMC7Q7Z402 723 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 FAM131BQ86XD5 332 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 OXCT2Q9BYC2 517 aaPredicted RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 CYP4F11Q9HBI6 524 aa25.98■■□□□ 1.75
RFFL-206ENST00000447669 MAGED2Q9UNF1 606 aaPredicted RBP25.98■■□□□ 1.75
RFFL-206ENST00000447669 LRRD1A4D1F6 860 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 CAPN15O75808 1086 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 RALAP11233 206 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 PCK1P35558 622 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 ACAP1Q15027 740 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 HADHQ16836 314 aaKnown RBP25.97■■□□□ 1.75
RFFL-206ENST00000447669 ZC3H12AQ5D1E8 599 aaKnown RBP25.97■■□□□ 1.75
RFFL-206ENST00000447669 KAZNQ674X7 775 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 DENND5BQ6ZUT9 1274 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 ZNF572Q7Z3I7 529 aaPredicted RBP25.97■■□□□ 1.75
RFFL-206ENST00000447669 CCDC185Q8N715 623 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 NPY6RQ99463 290 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 RNF14Q9UBS8 474 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 NR2E3Q9Y5X4 410 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 EFCAB8A8MWE9 144 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 CXCL14O95715 111 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 GLI1P08151 1106 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 CTSAP10619 480 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 YWHAGP61981 247 aaKnown RBP eCLIP25.97■■□□□ 1.75
RFFL-206ENST00000447669 ELF2Q15723 593 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 CA9Q16790 459 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 LRRC38Q5VT99 294 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 NT5C3BQ969T7 300 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 SLITRK1Q96PX8 696 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 GMIPQ9P107 970 aa25.97■■□□□ 1.75
RFFL-206ENST00000447669 AFF4Q9UHB7 1163 aaKnown RBP25.97■■□□□ 1.75
RFFL-206ENST00000447669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.96■■□□□ 1.75
RFFL-206ENST00000447669 KRIT1O00522 736 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 PRPSAP2O60256 369 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 RHOXF2BP0C7M4 288 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 ATF2P15336 505 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 GTF2F1P35269 517 aaKnown RBP eCLIP25.96■■□□□ 1.75
RFFL-206ENST00000447669 SMARCB1Q12824 385 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 SLC13A5Q86YT5 568 aaPredicted RBP25.96■■□□□ 1.75
RFFL-206ENST00000447669 KLHL7Q8IXQ5 586 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 EXD1Q8NHP7 514 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 GOLGA1Q92805 767 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 TCF25Q9BQ70 676 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 RHOXF2Q9BQY4 288 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 CERS4Q9HA82 394 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 PIGVQ9NUD9 493 aa25.96■■□□□ 1.75
RFFL-206ENST00000447669 C3orf70A6NLC5 250 aaPredicted RBP25.95■■□□□ 1.75
RFFL-206ENST00000447669 HIDE1A8MVS5 230 aa25.95■■□□□ 1.75
RFFL-206ENST00000447669 C2orf15Q8WU43 125 aaKnown RBP25.95■■□□□ 1.75
RFFL-206ENST00000447669 POF1BQ8WVV4 589 aa25.95■■□□□ 1.75
RFFL-206ENST00000447669 IRGQQ8WZA9 623 aa25.95■■□□□ 1.75
RFFL-206ENST00000447669 FAM118BQ9BPY3 351 aa25.95■■□□□ 1.75
RFFL-206ENST00000447669 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.95■■□□□ 1.75
RFFL-206ENST00000447669 TTC7AQ9ULT0 858 aaPredicted RBP25.95■■□□□ 1.75
RFFL-206ENST00000447669 RAB33AQ14088 237 aa25.95■■□□□ 1.74
RFFL-206ENST00000447669 PLPP4Q5VZY2 271 aa25.95■■□□□ 1.74
RFFL-206ENST00000447669 POLNQ7Z5Q5 900 aa25.95■■□□□ 1.74
RFFL-206ENST00000447669 SPPL3Q8TCT6 385 aa25.95■■□□□ 1.74
RFFL-206ENST00000447669 UBXN4Q92575 508 aa25.95■■□□□ 1.74
RFFL-206ENST00000447669 SNRNP25Q9BV90 132 aaKnown RBP25.95■■□□□ 1.74
RFFL-206ENST00000447669 YBX2Q9Y2T7 364 aaKnown RBP25.95■■□□□ 1.74
RFFL-206ENST00000447669 SART1O43290 800 aaKnown RBP25.94■■□□□ 1.74
RFFL-206ENST00000447669 KRT7P08729 469 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 TAF10Q12962 218 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 MMRN1Q13201 1228 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 KCTD6Q8NC69 237 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 KRT12Q99456 494 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 DDX47Q9H0S4 455 aaKnown RBP25.94■■□□□ 1.74
RFFL-206ENST00000447669 ANLNQ9NQW6 1124 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 SFMBT1Q9UHJ3 866 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 SCML2Q9UQR0 700 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 PLXNA3P51805 1871 aa25.94■■□□□ 1.74
RFFL-206ENST00000447669 SLC38A8A6NNN8 435 aa25.93■■□□□ 1.74
RFFL-206ENST00000447669 KDELR1P24390 212 aa25.93■■□□□ 1.74
RFFL-206ENST00000447669 YWHAQP27348 245 aa25.93■■□□□ 1.74
RFFL-206ENST00000447669 BTBD8Q5XKL5 378 aa25.93■■□□□ 1.74
RFFL-206ENST00000447669 SPOCD1Q6ZMY3 1216 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms