RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 NMUR1Q9HB89 426 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 ARHGEF4Q9NR80 690 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 SPHK2Q9NRA0 654 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDCD4-203ENST00000444997 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 CLIC5Q9NZA1 410 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 USP18Q9UMW8 372 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 USP3Q9Y6I4 520 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 VPS13AQ96RL7 3174 aa18.31■□□□□ 0.52
PDCD4-203ENST00000444997 AXIN1O15169 862 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
PDCD4-203ENST00000444997 VDRP11473 427 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 BCAT1P54687 386 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 STX17P56962 302 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 MRPS21P82921 87 aaKnown RBP18.3■□□□□ 0.52
PDCD4-203ENST00000444997 GOLGA7BQ2TAP0 167 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 PIGZQ86VD9 579 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 ZNF276Q8N554 614 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 GAB3Q8WWW8 586 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 TSPAN16Q9UKR8 245 aa18.3■□□□□ 0.52
PDCD4-203ENST00000444997 HOXC11O43248 304 aaPredicted RBP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 SDHBP21912 280 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 TNFRSF4P43489 277 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 COG7P83436 770 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 LMNB2Q03252 620 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 KDSRQ06136 332 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 CAMK4Q16566 473 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 RSRC2Q7L4I2 434 aaKnown RBP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 CACNA2D4Q7Z3S7 1137 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 SCD5Q86SK9 330 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 TMEM25Q86YD3 366 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 MIB1Q86YT6 1006 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 PPM1KQ8N3J5 372 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 NAT16Q8N8M0 369 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 TSTD1Q8NFU3 115 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 SRRTQ9BXP5 876 aaKnown RBP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 LRRC4Q9HBW1 653 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 POLR3BQ9NW08 1133 aaPredicted RBP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 KIAA1468Q9P260 1216 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 WDR35Q9P2L0 1181 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 DEC1Q9P2X7 70 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 NUDT5Q9UKK9 219 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
PDCD4-203ENST00000444997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDCD4-203ENST00000444997 A0A0A0MRY4 1105 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 TBC1D3BA6NDS4 549 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 XPO1O14980 1071 aaKnown RBP18.28■□□□□ 0.52
PDCD4-203ENST00000444997 MDM4O15151 490 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 LRP3O75074 770 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 ZBED1O96006 694 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 PAEPP09466 180 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 HOXC13P31276 330 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 TKTL1P51854 596 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 SPEM2Q0P670 501 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 KCNH2Q12809 1159 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 HSF5Q4G112 596 aaPredicted RBP18.28■□□□□ 0.52
PDCD4-203ENST00000444997 RAB41Q5JT25 222 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 C12orf40Q86WS4 652 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 TTC30AQ86WT1 665 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 WBP2Q969T9 261 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
PDCD4-203ENST00000444997 XPO6Q96QU8 1125 aaKnown RBP18.28■□□□□ 0.52
PDCD4-203ENST00000444997 EBF1Q9UH73 591 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 RASAL2Q9UJF2 1139 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 STRIP2Q9ULQ0 834 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 MMP17Q9ULZ9 603 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 ZNF510Q9Y2H8 683 aa18.28■□□□□ 0.52
PDCD4-203ENST00000444997 PRR5-ARHGAP8B1AHC4 643 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 TULP3O75386 442 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 ALDH1A2O94788 518 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 AFPP02771 609 aaKnown RBP18.27■□□□□ 0.52
PDCD4-203ENST00000444997 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 TIE1P35590 1138 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 ANP32AP39687 249 aaKnown RBP18.27■□□□□ 0.52
PDCD4-203ENST00000444997 DGKEP52429 567 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDCD4-203ENST00000444997 ARHGAP8P85298 464 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 PDE4CQ08493 712 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 EFEMP1Q12805 493 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 TRIM59Q8IWR1 403 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 SIX6OS1Q8N1H7 587 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 CCDC33Q8N5R6 958 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 FAM160A2Q8N612 972 aaPredicted RBP18.27■□□□□ 0.52
PDCD4-203ENST00000444997 EHBP1Q8NDI1 1231 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 BBS2Q9BXC9 721 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 DCLK3Q9C098 648 aa18.27■□□□□ 0.52
PDCD4-203ENST00000444997 EP300Q09472 2414 aaPredicted RBP18.27■□□□□ 0.51
PDCD4-203ENST00000444997 GVINP1Q7Z2Y8 2422 aa18.27■□□□□ 0.51
PDCD4-203ENST00000444997 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
PDCD4-203ENST00000444997 FOXD2O60548 495 aaPredicted RBP18.26■□□□□ 0.51
PDCD4-203ENST00000444997 GREM1O60565 184 aa18.26■□□□□ 0.51
PDCD4-203ENST00000444997 KLF8O95600 359 aaPredicted RBP18.26■□□□□ 0.51
PDCD4-203ENST00000444997 MARSP56192 900 aaKnown RBP18.26■□□□□ 0.51
PDCD4-203ENST00000444997 FOXK2Q01167 660 aa18.26■□□□□ 0.51
PDCD4-203ENST00000444997 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDCD4-203ENST00000444997 STILQ15468 1287 aa18.26■□□□□ 0.51
PDCD4-203ENST00000444997 EOGTQ5NDL2 527 aa18.26■□□□□ 0.51
PDCD4-203ENST00000444997 PM20D1Q6GTS8 502 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms