RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 TRIM72Q6ZMU5 477 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 NUDT18Q6ZVK8 323 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 GPRIN1Q7Z2K8 1008 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 ZDHHC17Q8IUH5 632 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 ZNF397Q8NF99 534 aaPredicted RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 CYP2S1Q96SQ9 504 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 ULBP1Q9BZM6 244 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 SMG9Q9H0W8 520 aaKnown RBP12.86□□□□□ -0.35
LTBR-204ENST00000444814 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 GKN1Q9NS71 199 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
LTBR-204ENST00000444814 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
LTBR-204ENST00000444814 NOTCH4Q99466 2003 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 DOCK8Q8NF50 2099 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 KANSL1LA0AUZ9 987 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 ADH1CP00326 375 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 CYP11B1P15538 503 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 GPD2P43304 727 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 UBASH3AP57075 661 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
LTBR-204ENST00000444814 FAM3CQ92520 227 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 NAA15Q9BXJ9 866 aaKnown RBP12.85□□□□□ -0.35
LTBR-204ENST00000444814 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
LTBR-204ENST00000444814 CCSER2Q9H7U1 834 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 SMPD4Q9NXE4 827 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 CFAP97Q9P2B7 532 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 SIK3Q9Y2K2 1263 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 SIT1Q9Y3P8 196 aa12.85□□□□□ -0.35
LTBR-204ENST00000444814 CAPN9O14815 690 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 GLI1P08151 1106 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 ATP1A3P13637 1013 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 FERP16591 822 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 RGS7P49802 495 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 MTA1Q13330 715 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 EFHC1Q5JVL4 640 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 HFE2Q6ZVN8 426 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 GANQ9H2C0 597 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 MARCH2Q9P0N8 246 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
LTBR-204ENST00000444814 HBS1LQ9Y450 684 aaKnown RBP12.84□□□□□ -0.35
LTBR-204ENST00000444814 NUP210Q8TEM1 1887 aaPredicted RBP12.84□□□□□ -0.35
LTBR-204ENST00000444814 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.83□□□□□ -0.36
LTBR-204ENST00000444814 LTFP02788 710 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 TPM1P09493 284 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 DESP17661 470 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 AOC1P19801 751 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 HARS2P49590 506 aaKnown RBP12.83□□□□□ -0.36
LTBR-204ENST00000444814 DAOAP59103 153 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 ZNF445P59923 1031 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 FANCCQ00597 558 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.36
LTBR-204ENST00000444814 PDCLQ13371 301 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 PMF1Q6P1K2 205 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 DENND1BQ6P3S1 775 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 BEND5Q7L4P6 421 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 C1orf131Q8NDD1 294 aaKnown RBP12.83□□□□□ -0.36
LTBR-204ENST00000444814 PLD4Q96BZ4 506 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 SMOC2Q9H3U7 446 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 PRUNE2Q8WUY3 3088 aa12.83□□□□□ -0.36
LTBR-204ENST00000444814 KRBA1A5PL33 1030 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 SPECC1L-ADORA2AF8WAN1 911 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
LTBR-204ENST00000444814 GFPT2O94808 682 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 CLCN1P35523 988 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 CHKAP35790 457 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 RPL34P49207 117 aaKnown RBP12.82□□□□□ -0.36
LTBR-204ENST00000444814 APBA1Q02410 837 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 EFEMP1Q12805 493 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 E2F5Q15329 346 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 DGKKQ5KSL6 1271 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 SYNPOQ8N3V7 929 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 RSPRY1Q96DX4 576 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 SERPINB11Q96P15 392 aa12.82□□□□□ -0.36
LTBR-204ENST00000444814 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms