RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 RTL3Q8N8U3 475 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 BHLHE22Q8NFJ8 381 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 RAB2BQ8WUD1 216 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ASZ1Q8WWH4 475 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 HTRA1Q92743 480 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 VMP1Q96GC9 406 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 CACNA2D2Q9NY47 1150 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 USE1Q9NZ43 259 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 SPATA2Q9UM82 520 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 WASF2Q9Y6W5 498 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PXDNLA1KZ92 1463 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 CDK12Q9NYV4 1490 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 E9PBE3 544 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 H0YCG3 227 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TNPO2O14787 897 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 KIAA0391O15091 583 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PDPK1O15530 556 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 APOA4P06727 396 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 NPR1P16066 1061 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 FECHP22830 423 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ADRA1DP25100 572 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ROR1Q01973 937 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 MZT2BQ6NZ67 158 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PRMT9Q6P2P2 845 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM72Q6ZMU5 477 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 IKBIPQ70UQ0 350 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 OTOAQ7RTW8 1153 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 RAB43Q86YS6 212 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 C12orf56Q8IXR9 622 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 BBS5Q8N3I7 341 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 SETD9Q8NE22 299 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TBCKQ8TEA7 893 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 POMGNT1Q8WZA1 660 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PURBQ96QR8 312 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 HEPHQ9BQS7 1158 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF717Q9BY31 904 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ANO3Q9BYT9 981 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 OR2B2Q9GZK3 357 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PARVAQ9NVD7 372 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 MAP3K20Q9NYL2 800 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 KLHL3Q9UH77 587 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 XPO7Q9UIA9 1087 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PADI4Q9UM07 663 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 FAM32AQ9Y421 112 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PCDHB4Q9Y5E5 795 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 FUOMA2VDF0 154 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM64A6NGJ6 449 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM64BA6NI03 449 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PEX1O43933 1283 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ECE2O60344 883 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TPST1O60507 370 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ZBTB7AO95365 584 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 CNTFP26441 200 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PSMC6P62333 389 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 CHRNDQ07001 517 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 IFRD2Q12894 506 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 CSTF3Q12996 717 aaKnown RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TBC1D10BQ4KMP7 808 aaPredicted RBP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 FAM45BPQ6NSW5 357 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 DHFR2Q86XF0 187 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 DGKHQ86XP1 1220 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 LCORLQ8N3X6 602 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 DCLK2Q8N568 766 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 DNAAF3Q8N9W5 541 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 GSTCDQ8NEC7 633 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 TTC16Q8NEE8 873 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 KBTBD8Q8NFY9 601 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 UPF1Q92900 1129 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCN11A-202ENST00000444237 VPS39Q96JC1 886 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 FAR2Q96K12 515 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 QPCTLQ9NXS2 382 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 PCYOX1Q9UHG3 505 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ADAM30Q9UKF2 790 aa5.31□□□□□ -1.56
SCN11A-202ENST00000444237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TTC34A8MYJ7 566 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FAM47E-STBD1D6RA91 191 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PDXKO00764 312 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 TGDSO95455 350 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 H6PDO95479 791 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 YES1P07947 543 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PEX2P28328 305 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CRABP2P29373 138 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 RPA3P35244 121 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ACTR3P61158 418 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 PKN2Q16513 984 aaKnown RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZBED5Q49AG3 693 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 CCDC157Q569K6 752 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 KCNT1Q5JUK3 1230 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 WDR59Q6PJI9 974 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 FOXP4Q8IVH2 680 aaPredicted RBP5.3□□□□□ -1.56
SCN11A-202ENST00000444237 AGR3Q8TD06 166 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 VPS33AQ96AX1 596 aa5.3□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF496Q96IT1 587 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms