RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZNF697Q5TEC3 545 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC25A41Q8N5S1 370 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 ZNF557Q8N988 423 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 WNT8BQ93098 351 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 TCF25Q9BQ70 676 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 FBXL5Q9UKA1 691 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 TNRC6CQ9HCJ0 1690 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 FRMD3A2A2Y4 597 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 TRUB2O95900 331 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 OR4Q2P0C623 313 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 NXNQ6DKJ4 435 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 NAPEPLDQ6IQ20 393 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 C4orf22Q6V702 233 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 SERINC5Q86VE9 423 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 DNAAF5Q86Y56 855 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 PCYT2Q99447 389 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM8A1Q9UBU6 413 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 PMPCBO75439 489 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 AKT1P31749 480 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 NUMBP49757 651 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 TFAP2DQ7Z6R9 452 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 PRR23AA6NEV1 266 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 C4BPAP04003 597 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 OR1E1P30953 314 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 KCNMA1Q12791 1236 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 C6orf118Q5T5N4 469 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 FRA10AC1Q70Z53 315 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM71DQ8N9W8 422 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 EXT2Q93063 718 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 DUSP16Q9BY84 665 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 KIAA0100Q14667 2235 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 CALCAP01258 141 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 SP100P23497 879 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 SMAD1Q15797 465 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 EPM2AIP1Q7L775 607 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 TTC8Q8TAM2 541 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 LRRC8CQ8TDW0 803 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 MFSD1Q9H3U5 465 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 TBC1D13Q9NVG8 400 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 PAPPAQ13219 1627 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 MYADML2A6NDP7 307 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 PRKCIP41743 596 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 POU5F1Q01860 360 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM187BQ17R55 369 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 KCNT2Q6UVM3 1135 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 EXD1Q8NHP7 514 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 TKTL2Q9H0I9 626 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 NAV1Q8NEY1 1877 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 DNAJC6O75061 913 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 GPM6BQ13491 265 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 KCTD16Q68DU8 428 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 TRIM42Q8IWZ5 723 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 LACRTQ9GZZ8 138 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 GANQ9H2C0 597 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 ATP13A1Q9HD20 1204 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 DUSP10Q9Y6W6 482 aa14.61□□□□□ -0.07
SMARCA4-204ENST00000444061 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 CHKAP35790 457 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 ACAP1Q15027 740 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC39A5Q6ZMH5 540 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 NFKBIZQ9BYH8 718 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 ZFATQ9P243 1243 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 DOLKQ9UPQ8 538 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 HGSO14964 777 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 KCNJ1P48048 391 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 IL9RQ01113 521 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 INTS6LQ5JSJ4 861 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 TPGS1Q6ZTW0 290 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 GPR152Q8TDT2 470 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 SHISA4Q96DD7 197 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 TRAIPQ9BWF2 469 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 CNGB3Q9NQW8 809 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 CCDC78A2IDD5 438 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 CFAP99D6REC4 459 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 TLR5O60602 858 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 GPC4O75487 556 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 PIGRP01833 764 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 TYMPP19971 482 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 CYP2F1P24903 491 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 ATP1A2P50993 1020 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 GEMP55040 296 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 SPOCD1Q6ZMY3 1216 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 PBXIP1Q96AQ6 731 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 FRMD8P1Q9BZ68 369 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 MRFAP1Q9Y605 127 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 DDX60Q8IY21 1712 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 SMAD3P84022 425 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 ADCY2Q08462 1091 aa14.6□□□□□ -0.07
SMARCA4-204ENST00000444061 LPIN1Q14693 890 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms