RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 PLA2G6O60733 806 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 SERPINF2P08697 491 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 CYP2A7P20853 494 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 PPM1AP35813 382 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 FIBCD1Q8N539 461 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 ROPN1BQ9BZX4 212 aaPredicted RBP11.58□□□□□ -0.56
FN1-211ENST00000443816 ROPN1Q9HAT0 212 aaPredicted RBP11.58□□□□□ -0.56
FN1-211ENST00000443816 MAGEB16A2A368 324 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 F8W810 466 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 SPTLC1O15269 473 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 TLL1O43897 1013 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 PNMA6AP0CW24 399 aaPredicted RBP11.58□□□□□ -0.56
FN1-211ENST00000443816 PCNAP12004 261 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 CNTFP26441 200 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 CDC16Q13042 620 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 SETMARQ53H47 684 aaPredicted RBP11.58□□□□□ -0.56
FN1-211ENST00000443816 ADAM2Q99965 735 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 MRIQ9BWK5 157 aa11.58□□□□□ -0.56
FN1-211ENST00000443816 SPEF2Q9C093 1822 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 DAB2P98082 770 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 LVRNQ6Q4G3 990 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 DENND5BQ6ZUT9 1274 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 LRRC40Q9H9A6 602 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 RPS6KB2Q9UBS0 482 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 AP4E1Q9UPM8 1137 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 MAPK9P45984 424 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 BLVRAP53004 296 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 PTPN11Q06124 597 aaPredicted RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 DNAL1Q4LDG9 190 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 ASAH2Q9NR71 780 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 GTF3C4Q9UKN8 822 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 RBAK-RBAKDNI3L0D1 243 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 ENO1P06733 434 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 MTSS1LQ765P7 747 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 NECAB2Q7Z6G3 386 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 DDX42Q86XP3 938 aaKnown RBP eCLIP11.57□□□□□ -0.56
FN1-211ENST00000443816 SUSD6Q92537 303 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 SGSM3Q96HU1 749 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 PNKPQ96T60 521 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 RANBP17Q9H2T7 1088 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 FMR1Q06787 632 aaKnown RBP eCLIP11.57□□□□□ -0.56
FN1-211ENST00000443816 ZPBP2Q6X784 338 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 USP45Q70EL2 814 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 CCDC60Q8IWA6 550 aaPredicted RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 MED8Q96G25 268 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 APBA2Q99767 749 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 BLOC1S6Q9UL45 172 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 NFASCO94856 1347 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 TBC1D3BA6NDS4 549 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 PFDN1O60925 122 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 ZNF135P52742 658 aaPredicted RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 MRPS6P82932 125 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 MARC1Q5VT66 337 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 TUBGCP4Q9UGJ1 667 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 GAKO14976 1311 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 ESYT3A0FGR9 886 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 FGF19O95750 216 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 CELF3Q5SZQ8 465 aaKnown RBP11.57□□□□□ -0.56
FN1-211ENST00000443816 PDCD2LQ9BRP1 358 aa11.57□□□□□ -0.56
FN1-211ENST00000443816 CYTH3O43739 400 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 ENO3P13929 434 aaPredicted RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 MIEF1Q9NQG6 463 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 MTO1Q9Y2Z2 717 aaKnown RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 RAD54BQ9Y620 910 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 THOP1P52888 689 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 CSTF3Q12996 717 aaKnown RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 LRRC14Q15048 493 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 CCDC85BQ15834 202 aaPredicted RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 C16orf87Q6PH81 154 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 LRIG3Q6UXM1 1119 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 LZTR1Q8N653 840 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 KRT84Q9NSB2 600 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 ENDOD1O94919 500 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 SHMT1P34896 483 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 ADCYAP1R1P41586 468 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 MCCC1Q96RQ3 725 aaPredicted RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 ZNF185O15231 689 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 PGM1P36871 562 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 BTKQ06187 659 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 GRB10Q13322 594 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 ZCCHC8Q6NZY4 707 aaKnown RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 CASP10Q92851 521 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 ACSF2Q96CM8 615 aaPredicted RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 ILKAPQ9H0C8 392 aaPredicted RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 RUVBL2Q9Y230 463 aaKnown RBP11.56□□□□□ -0.56
FN1-211ENST00000443816 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.564e-15■■■■□ 22.8
FN1-211ENST00000443816 ADH1AP07327 375 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 FGFR1P11362 822 aa11.56□□□□□ -0.56
FN1-211ENST00000443816 GZMAP12544 262 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms