RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 FAM237AA0A1B0GTK4 181 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 TCRBV21S2A2A0A5A6 115 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 TBC1D3BA6NDS4 549 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 HLA-DRAP01903 254 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 MYL1P05976 194 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 NOVA1P51513 510 aaKnown RBP20.99■□□□□ 0.95
EDEM1-203ENST00000443790 ANO4Q32M45 955 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 PREPLQ4J6C6 727 aaPredicted RBP20.99■□□□□ 0.95
EDEM1-203ENST00000443790 C1orf220Q5T0J3 134 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 LPCAT2Q7L5N7 544 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 TMEM25Q86YD3 366 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 ZNF513Q8N8E2 541 aaPredicted RBP20.99■□□□□ 0.95
EDEM1-203ENST00000443790 KCNV2Q8TDN2 545 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 PIGKQ92643 395 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 TMEM9BQ9NQ34 198 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 FRMD4BQ9Y2L6 1034 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 PLXND1Q9Y4D7 1925 aa20.99■□□□□ 0.95
EDEM1-203ENST00000443790 GREM1O60565 184 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 FAM200BP0CF97 657 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 ADORA2BP29275 332 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 MAP7D1Q3KQU3 841 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 C10orf76Q5T2E6 689 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 CLEC20AQ6ZU45 233 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 HTR3DQ70Z44 454 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 GPRIN1Q7Z2K8 1008 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 TRMT11Q7Z4G4 463 aaKnown RBP20.98■□□□□ 0.95
EDEM1-203ENST00000443790 FRMD1Q8N878 549 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 TWNKQ96RR1 684 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 CYLDQ9NQC7 956 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 EVLQ9UI08 416 aaPredicted RBP20.98■□□□□ 0.95
EDEM1-203ENST00000443790 MBD1Q9UIS9 605 aaPredicted RBP20.98■□□□□ 0.95
EDEM1-203ENST00000443790 TRAF3IP3Q9Y228 551 aa20.98■□□□□ 0.95
EDEM1-203ENST00000443790 TNRC6BQ9UPQ9 1833 aaKnown RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 CDX4O14627 284 aaPredicted RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 MAPK13O15264 365 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 MAP3K13O43283 966 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 CALUO43852 315 aaPredicted RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 TBX18O95935 607 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 TRIM21P19474 475 aaKnown RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 IRX4P78413 519 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 INCA1Q0VD86 236 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 BYSLQ13895 437 aaKnown RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 NUDT18Q6ZVK8 323 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 ARMCX6Q7L4S7 300 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 TMEFF1Q8IYR6 380 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 PGBD3Q8N328 593 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 HNRNPABQ99729 332 aaKnown RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 KLF16Q9BXK1 252 aaPredicted RBP20.97■□□□□ 0.95
EDEM1-203ENST00000443790 IMPG2Q9BZV3 1241 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 OSER1Q9NX31 292 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 SCML2Q9UQR0 700 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 USP24Q9UPU5 2620 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 MYH10P35580 1976 aa20.97■□□□□ 0.95
EDEM1-203ENST00000443790 HHLA1C9JL84 531 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 TRIM24O15164 1050 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 CYP26A1O43174 497 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 ZNF202O95125 648 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 KIF20AO95235 890 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 PTGER3P43115 390 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 VAMP7P51809 220 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 SPDYCQ5MJ68 293 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 GRAMD4Q6IC98 578 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 JAKMIP2Q96AA8 810 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 APOBEC3GQ9HC16 384 aaKnown RBP20.96■□□□□ 0.95
EDEM1-203ENST00000443790 PNPLA8Q9NP80 782 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■■■□ 22.4
EDEM1-203ENST00000443790 DNAJC17Q9NVM6 304 aaKnown RBP20.96■□□□□ 0.95
EDEM1-203ENST00000443790 LSM7Q9UK45 103 aaKnown RBP20.96■□□□□ 0.95
EDEM1-203ENST00000443790 HCN2Q9UL51 889 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 STARD13Q9Y3M8 1113 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 ZFHX4Q86UP3 3567 aa20.96■□□□□ 0.95
EDEM1-203ENST00000443790 GIPC1O14908 333 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 CACNG3O60359 315 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 PRR29P0C7W0 189 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 TRIM49P0CI25 452 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 TRIM49CP0CI26 452 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 HOXB2P14652 356 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 NR2F2P24468 414 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 ATP5C1P36542 298 aaKnown RBP20.95■□□□□ 0.94
EDEM1-203ENST00000443790 GOLGA8FQ08AF8 430 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 GOLGA8DPQ0D2H9 430 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 NFIL3Q16649 462 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 TRIM61Q5EBN2 209 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 SH3PXD2AQ5TCZ1 1133 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 KRBA2Q6ZNG9 492 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 INTS8Q75QN2 995 aaKnown RBP20.95■□□□□ 0.94
EDEM1-203ENST00000443790 MIB1Q86YT6 1006 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 SYT12Q8IV01 421 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 TAS1R2Q8TE23 839 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 CYFIP2Q96F07 1278 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 BBS2Q9BXC9 721 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 NT5C1AQ9BXI3 368 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 NIF3L1Q9GZT8 377 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 CYP3A43Q9HB55 503 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 NMUR1Q9HB89 426 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 MARK1Q9P0L2 795 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 PCDHA5Q9Y5H7 936 aa20.95■□□□□ 0.94
EDEM1-203ENST00000443790 MYO18AQ92614 2054 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms