RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 GMIPQ9P107 970 aa14.59□□□□□ -0.07
PTPRE-203ENST00000442830 CHORDC1Q9UHD1 332 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-203ENST00000442830 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-203ENST00000442830 SCML2Q9UQR0 700 aa14.59□□□□□ -0.07
PTPRE-203ENST00000442830 ZNF510Q9Y2H8 683 aa14.59□□□□□ -0.07
PTPRE-203ENST00000442830 UPK3BL1B0FP48 263 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 UPK3BL2E5RIL1 263 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 GFRA2O00451 464 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 NPC1O15118 1278 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CACNG3O60359 315 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 ASS1P00966 412 aaKnown RBP14.58□□□□□ -0.08
PTPRE-203ENST00000442830 NR3C1P04150 777 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
PTPRE-203ENST00000442830 RDXP35241 583 aaKnown RBP14.58□□□□□ -0.08
PTPRE-203ENST00000442830 PIK3CAP42336 1068 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CASP4P49662 377 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 ZNF132P52740 706 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CDH8P55286 799 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 HNRNPDQ14103 355 aaKnown RBP14.58□□□□□ -0.08
PTPRE-203ENST00000442830 NFIL3Q16649 462 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 DUOXA1Q1HG43 343 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 C10orf76Q5T2E6 689 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 SH3PXD2AQ5TCZ1 1133 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 PAQR9Q6ZVX9 377 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 INTS8Q75QN2 995 aaKnown RBP14.58□□□□□ -0.08
PTPRE-203ENST00000442830 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 BBS7Q8IWZ6 715 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 ZNF276Q8N554 614 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 SLC2A14Q8TDB8 520 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 KCTD10Q9H3F6 313 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 MARK1Q9P0L2 795 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 INVSQ9Y283 1065 aa14.58□□□□□ -0.08
PTPRE-203ENST00000442830 CACNA1EQ15878 2313 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 CDX4O14627 284 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-203ENST00000442830 ADAM23O75077 832 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 VNN1O95497 513 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 PROS1P07225 676 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 HOXB2P14652 356 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 RPL13P26373 211 aaKnown RBP14.57□□□□□ -0.08
PTPRE-203ENST00000442830 NDST1P52848 882 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 ATXN3P54252 364 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-203ENST00000442830 MAP3K7CLP57077 242 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 IRX4P78413 519 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 MAP7D1Q3KQU3 841 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 SV2AQ7L0J3 742 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 HDDC3Q8N4P3 179 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 CCDC34Q96HJ3 373 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 HNRNPABQ99729 332 aaKnown RBP14.57□□□□□ -0.08
PTPRE-203ENST00000442830 SMOQ99835 787 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 NT5C1AQ9BXI3 368 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
PTPRE-203ENST00000442830 DNMT3LQ9UJW3 386 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 RCOR1Q9UKL0 485 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 TRAF3IP3Q9Y228 551 aa14.57□□□□□ -0.08
PTPRE-203ENST00000442830 FAM208BQ5VWN6 2430 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 ACTN4O43707 911 aaKnown RBP14.56□□□□□ -0.08
PTPRE-203ENST00000442830 KLRC4O43908 158 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 RALAP11233 206 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 KRT13P13646 458 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 PLA2G4AP47712 749 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 RPL6Q02878 288 aaKnown RBP14.56□□□□□ -0.08
PTPRE-203ENST00000442830 STK4Q13043 487 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 KMT5BQ4FZB7 885 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 CEP135Q66GS9 1140 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 TMEFF1Q8IYR6 380 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 KIAA0895Q8NCT3 520 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 ZMIZ2Q8NF64 920 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 PLEKHO2Q8TD55 490 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 KLF16Q9BXK1 252 aaPredicted RBP14.56□□□□□ -0.08
PTPRE-203ENST00000442830 DCLK3Q9C098 648 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 SUSD2Q9UGT4 822 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 PILRBQ9UKJ0 227 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 SLC6A14Q9UN76 642 aa14.56□□□□□ -0.08
PTPRE-203ENST00000442830 NEDD8-MDP1E9PL57 170 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 H0Y626 953 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SCAMP3O14828 347 aaKnown RBP14.55□□□□□ -0.08
PTPRE-203ENST00000442830 TRIM16O95361 564 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 HLA-DRAP01903 254 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SYPP08247 313 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SERPINF2P08697 491 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 IRF1P10914 325 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CCDC130P13994 396 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 TYRP14679 529 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 HNRNPLP14866 589 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPRE-203ENST00000442830 ENGP17813 658 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CMA1P23946 247 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CASP1P29466 404 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 GTF2H1P32780 548 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 CHKAP35790 457 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 ASPAP45381 313 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 VAMP7P51809 220 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SLC8A3P57103 927 aa14.55□□□□□ -0.08
PTPRE-203ENST00000442830 GFPT1Q06210 699 aaPredicted RBP14.55□□□□□ -0.08
PTPRE-203ENST00000442830 SYCP2LQ5T4T6 812 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms