RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SYNCQ9H7C4 482 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 GKN1Q9NS71 199 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 ABCC13Q9NSE7 274 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 CFAP97Q9P2B7 532 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 DNMT3LQ9UJW3 386 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 A0A1W2PQJ5 194 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 FAM170AA1A519 330 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 MDM4O15151 490 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 PAPSS1O43252 624 aaPredicted RBP12.92□□□□□ -0.34
USP1-203ENST00000442679 SART1O43290 800 aaKnown RBP12.92□□□□□ -0.34
USP1-203ENST00000442679 LTFP02788 710 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 TCF3P15923 654 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
USP1-203ENST00000442679 FMO1Q01740 532 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 EFEMP1Q12805 493 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 USP4Q13107 963 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 MTF1Q14872 753 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 ASIC2Q16515 512 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 HFE2Q6ZVN8 426 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 ERICH1Q86X53 443 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 DDX42Q86XP3 938 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP1-203ENST00000442679 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 EDEM1Q92611 657 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 ZFYVE19Q96K21 471 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 KLF16Q9BXK1 252 aaPredicted RBP12.92□□□□□ -0.34
USP1-203ENST00000442679 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 WNT16Q9UBV4 365 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 TJP2Q9UDY2 1190 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP1-203ENST00000442679 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
USP1-203ENST00000442679 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 M0R296 226 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 AP5Z1O43299 807 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 ERBB2P04626 1255 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 IRF1P10914 325 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 NOMO3P69849 1222 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 ZBED6P86452 979 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 SLC44A4Q53GD3 710 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 NAA35Q5VZE5 725 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 SPECC1LQ69YQ0 1117 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 OR6B2Q6IFH4 312 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 SARM1Q6SZW1 724 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 TRIM72Q6ZMU5 477 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 MIB1Q86YT6 1006 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 MSANTD4Q8NCY6 345 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 IPO4Q8TEX9 1081 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 DNASE1L2Q92874 299 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 PCDHB18PQ96TA0 734 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 FAM83CQ9BQN1 747 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 TRPV5Q9NQA5 729 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 OLA1Q9NTK5 396 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 MARCH2Q9P0N8 246 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 LUC7L2Q9Y383 392 aaKnown RBP12.91□□□□□ -0.34
USP1-203ENST00000442679 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 TRIOO75962 3097 aa12.91□□□□□ -0.34
USP1-203ENST00000442679 E2F8A0AVK6 867 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 ARNTLO00327 626 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
USP1-203ENST00000442679 GYPCP04921 128 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 NCAM1P13591 858 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TNFAIP3P21580 790 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 CASP14P31944 242 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 GABRB2P47870 512 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 IFNAR2P48551 515 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 YWHAZP63104 245 aaKnown RBP12.9□□□□□ -0.34
USP1-203ENST00000442679 COG7P83436 770 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TNK2Q07912 1038 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 PDGFRLQ15198 375 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TAF5Q15542 800 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 CLEC16AQ2KHT3 1053 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 IER5LQ5T953 404 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 FAM183BPQ6ZVS7 135 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 SIX5Q8N196 739 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TTC8Q8TAM2 541 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 OSCP1Q8WVF1 389 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 WBP2Q969T9 261 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 FAM149B1Q96BN6 582 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
USP1-203ENST00000442679 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms