RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 LSM7Q9UK45 103 aaKnown RBP13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 FBXO4Q9UKT5 387 aa13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 NDRG2Q9UN36 371 aaKnown RBP13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZNF510Q9Y2H8 683 aa13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
CDCA4P3-201ENST00000442572 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 M0QYV0 167 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 SART1O43290 800 aaKnown RBP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ADH1CP00326 375 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ARSAP15289 507 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 DRD1P21728 446 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 GNA15P30679 374 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 GJA4P35212 333 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 SOX9P48436 509 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 PTK2Q05397 1052 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ADIGQ0VDE8 80 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 GRSF1Q12849 480 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 CCINQ13939 588 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 KRT31Q15323 416 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 FKBP15Q5T1M5 1219 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZNF606Q8WXB4 792 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZSWIM1Q9BR11 485 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 TRIM62Q9BVG3 475 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 LMAN1LQ9HAT1 526 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ABCC13Q9NSE7 274 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 OSER1Q9NX31 292 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 ATG2BQ96BY7 2078 aa13.17□□□□□ -0.3
CDCA4P3-201ENST00000442572 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 BECN2A8MW95 431 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 TULP2O00295 520 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 GPD2P43304 727 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PGFP49763 221 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 DAOAP59103 153 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PON2Q15165 354 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 ARHGAP44Q17R89 818 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 HSP90AA4PQ58FG1 418 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PMF1Q6P1K2 205 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 TXNDC11Q6PKC3 985 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 CD101Q93033 1021 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 P2RY13Q9BPV8 354 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 LIMA1Q9UHB6 759 aaKnown RBP13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PCDHGC3Q9UN70 934 aa13.16□□□□□ -0.3
CDCA4P3-201ENST00000442572 PROB1E7EW31 1015 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 H0Y858 1186 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 THAP12O43422 761 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 TBX18O95935 607 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 CYP17A1P05093 508 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZNF18P17022 549 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 USP8P40818 1118 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 NBL1P41271 181 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 CCR3P51677 355 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 SNX16P57768 344 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 GAD2Q05329 585 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 DHCR24Q15392 516 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 KLHDC7AQ5VTJ3 777 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 ZC3H14Q6PJT7 736 aaKnown RBP13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 RSRC2Q7L4I2 434 aaKnown RBP13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 BEND5Q7L4P6 421 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 BHLHA9Q7RTU4 235 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 TTC16Q8NEE8 873 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 TTC8Q8TAM2 541 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 RNF139Q8WU17 664 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 GOLGA1Q92805 767 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 CHFRQ96EP1 664 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 VPS16Q9H269 839 aa13.15□□□□□ -0.3
CDCA4P3-201ENST00000442572 LHX5Q9H2C1 402 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms