RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 RAB44Q7Z6P3 723 aaPredicted RBP13.84□□□□□ -0.19
SP4-203ENST00000440636 CHCHD4Q8N4Q1 142 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 ACOX2Q99424 681 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 VRTNQ9H8Y1 702 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 DMAP1Q9NPF5 467 aaPredicted RBP13.84□□□□□ -0.19
SP4-203ENST00000440636 DNAAF2Q9NVR5 837 aaKnown RBP13.84□□□□□ -0.19
SP4-203ENST00000440636 COMMD8Q9NX08 183 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 GMIPQ9P107 970 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 APC2O95996 2303 aa13.84□□□□□ -0.19
SP4-203ENST00000440636 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 GJB3O75712 270 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 IRF1P10914 325 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 SYT1P21579 422 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 CDH8P55286 799 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 SNRPFP62306 86 aaKnown RBP13.83□□□□□ -0.2
SP4-203ENST00000440636 ZNF423Q2M1K9 1284 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 GRAMD4Q6IC98 578 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 TRIML1Q8N9V2 468 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
SP4-203ENST00000440636 SCFD1Q8WVM8 642 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 SYAP1Q96A49 352 aaPredicted RBP13.83□□□□□ -0.2
SP4-203ENST00000440636 SMARCD1Q96GM5 515 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 HSPA12BQ96MM6 686 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 GABRG3Q99928 467 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 LRRC27Q9C0I9 530 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 CD93Q9NPY3 652 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
SP4-203ENST00000440636 CYP8B1Q9UNU6 501 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 UBE4BO95155 1302 aa13.83□□□□□ -0.2
SP4-203ENST00000440636 IGSF10Q6WRI0 2623 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 PRRT4C9JH25 899 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 CACNG3O60359 315 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 TLR5O60602 858 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 SYPP08247 313 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
SP4-203ENST00000440636 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
SP4-203ENST00000440636 ASIC1P78348 528 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 EHHADHQ08426 723 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 HNRNPDQ14103 355 aaKnown RBP13.82□□□□□ -0.2
SP4-203ENST00000440636 ACAP1Q15027 740 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 HTR3DQ70Z44 454 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 PROSER1Q86XN7 944 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 NELFCDQ8IXH7 590 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 CHPFQ8IZ52 775 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 FUKQ8N0W3 1084 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 PLEKHO2Q8TD55 490 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 ERLEC1Q96DZ1 483 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 ZNF419Q96HQ0 510 aaPredicted RBP13.82□□□□□ -0.2
SP4-203ENST00000440636 TNIP3Q96KP6 325 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 SMOQ99835 787 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
SP4-203ENST00000440636 NACA2Q9H009 215 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 SDCBP2Q9H190 292 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 CUEDC2Q9H467 287 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 KRT82Q9NSB4 513 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
SP4-203ENST00000440636 KNL1Q8NG31 2342 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 NEDD8-MDP1E9PL57 170 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 ZBTB24O43167 697 aaPredicted RBP13.81□□□□□ -0.2
SP4-203ENST00000440636 SH3BP5O60239 455 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 AP1G2O75843 785 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 BEST1O76090 585 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 TBX18O95935 607 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 TYRP14679 529 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 CASP4P49662 377 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 ZNF699Q32M78 642 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 SDE2Q6IQ49 451 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 C12orf56Q8IXR9 622 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 MRGPRX1Q96LB2 322 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 XPO6Q96QU8 1125 aaKnown RBP13.81□□□□□ -0.2
SP4-203ENST00000440636 BBS2Q9BXC9 721 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 SLC6A17Q9H1V8 727 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 MTMR6Q9Y217 621 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 MYH10P35580 1976 aa13.81□□□□□ -0.2
SP4-203ENST00000440636 PHACTR2O75167 634 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 CISD3P0C7P0 127 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 CCDC130P13994 396 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 AMPD3Q01432 767 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 TRIP6Q15654 476 aaKnown RBP13.8□□□□□ -0.2
SP4-203ENST00000440636 BMT2Q1RMZ1 405 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 PLEKHG6Q3KR16 790 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 TPGS1Q6ZTW0 290 aa13.8□□□□□ -0.2
SP4-203ENST00000440636 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms