RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MDM4O15151 490 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 ZBED1O96006 694 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 RALAP11233 206 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 ADIGQ0VDE8 80 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 TMEM196Q5HYL7 178 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 DGKKQ5KSL6 1271 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 CDKAL1Q5VV42 579 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 NAIF1Q69YI7 327 aaPredicted RBP24.84■■□□□ 1.57
VARS-217ENST00000440048 BHLHA9Q7RTU4 235 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 ADGRG2Q8IZP9 1017 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 ARHGAP18Q8N392 663 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 TAB2Q9NYJ8 693 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 TBC1D14Q9P2M4 693 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 DNMT3LQ9UJW3 386 aa24.84■■□□□ 1.57
VARS-217ENST00000440048 AJAP1Q9UKB5 411 aaPredicted RBP24.84■■□□□ 1.57
VARS-217ENST00000440048 ATG2BQ96BY7 2078 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 PES1O00541 588 aaKnown RBP24.83■■□□□ 1.57
VARS-217ENST00000440048 LAMTOR5O43504 91 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 CYP17A1P05093 508 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 RGS7P49802 495 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 YWHAGP61981 247 aaKnown RBP eCLIP24.83■■□□□ 1.57
VARS-217ENST00000440048 CCINQ13939 588 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 FSTL4Q6MZW2 842 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 DPY19L2P1Q6NXN4 242 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 PMF1Q6P1K2 205 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 TADA2BQ86TJ2 420 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 SHC3Q92529 594 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 IER2Q9BTL4 223 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 FBRSL1Q9HCM7 1045 aaKnown RBP24.83■■□□□ 1.57
VARS-217ENST00000440048 FANCLQ9NW38 375 aa24.83■■□□□ 1.57
VARS-217ENST00000440048 MYO15AQ9UKN7 3530 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 GABBR2O75899 941 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 LETM1O95202 739 aaPredicted RBP24.82■■□□□ 1.56
VARS-217ENST00000440048 SP9P0CG40 484 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 USP8P40818 1118 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 GALK1P51570 392 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 KCNMA1Q12791 1236 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 GRSF1Q12849 480 aaKnown RBP eCLIP24.82■■□□□ 1.56
VARS-217ENST00000440048 GAS6Q14393 721 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 DHCR24Q15392 516 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 BBS7Q8IWZ6 715 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 SIX6OS1Q8N1H7 587 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 CDK5RAP1Q96SZ6 601 aaKnown RBP24.82■■□□□ 1.56
VARS-217ENST00000440048 P2RY13Q9BPV8 354 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 ACP6Q9NPH0 428 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 DNAJC12Q9UKB3 198 aa24.82■■□□□ 1.56
VARS-217ENST00000440048 GREM1O60565 184 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 LCP1P13796 627 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 GNA15P30679 374 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 MYL5Q02045 173 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 TYRO3Q06418 890 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 GOLGA8FQ08AF8 430 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 GOLGA8DPQ0D2H9 430 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 KRT31Q15323 416 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 GAB4Q2WGN9 574 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 CAVIN1Q6NZI2 390 aaKnown RBP24.81■■□□□ 1.56
VARS-217ENST00000440048 RHBDF2Q6PJF5 856 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 MAMSTRQ6ZN01 415 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 Q6ZS52 159 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 ZNF606Q8WXB4 792 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 OTUB2Q96DC9 234 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 CNGB3Q9NQW8 809 aa24.81■■□□□ 1.56
VARS-217ENST00000440048 FANCMQ8IYD8 2048 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 PIK3R2O00459 728 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 THAP12O43422 761 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 MED7O43513 233 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 DENND1BQ6P3S1 775 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 HTR3DQ70Z44 454 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 MIB1Q86YT6 1006 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 SCML4Q8N228 414 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 SYNPOQ8N3V7 929 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 CD101Q93033 1021 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 EXOC4Q96A65 974 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 HSFY1Q96LI6 401 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 VPS16Q9H269 839 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 PRMT8Q9NR22 394 aaPredicted RBP24.8■■□□□ 1.56
VARS-217ENST00000440048 RASAL2Q9UJF2 1139 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 FBXO4Q9UKT5 387 aa24.8■■□□□ 1.56
VARS-217ENST00000440048 DMDP11532 3685 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 YJEFN3A6XGL0 299 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 E7ENQ6 273 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 GFRA3O60609 400 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 EGFP01133 1207 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 DRD1P21728 446 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 OPRD1P41143 372 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 GPD2P43304 727 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 DAOAP59103 153 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 CSTF1Q05048 431 aaKnown RBP24.79■■□□□ 1.56
VARS-217ENST00000440048 EFEMP1Q12805 493 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 BTBD8Q5XKL5 378 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 SMYD5Q6GMV2 418 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 RSRC2Q7L4I2 434 aaKnown RBP24.79■■□□□ 1.56
VARS-217ENST00000440048 SPEM1Q8N4L4 309 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 SEMA4AQ9H3S1 761 aa24.79■■□□□ 1.56
VARS-217ENST00000440048 LSM7Q9UK45 103 aaKnown RBP24.79■■□□□ 1.56
VARS-217ENST00000440048 FOXN3O00409 490 aaPredicted RBP24.78■■□□□ 1.56
VARS-217ENST00000440048 ADH1CP00326 375 aa24.78■■□□□ 1.56
VARS-217ENST00000440048 MEA1Q16626 185 aa24.78■■□□□ 1.56
VARS-217ENST00000440048 LY6G5CQ5SRR4 150 aa24.78■■□□□ 1.56
VARS-217ENST00000440048 KLHDC7AQ5VTJ3 777 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms