RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 VDRP11473 427 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 GNAZP19086 355 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 NEK3P51956 506 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 TMPRSS15P98073 1019 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 RCN2Q14257 317 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 KPNB1Q14974 876 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PRKD1Q15139 912 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 SH3D19Q5HYK7 790 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 BSPRYQ5W0U4 402 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 VPS52Q8N1B4 723 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 FBXO27Q8NI29 283 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 ALKBH8Q96BT7 664 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 NAF1Q96HR8 494 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PGLYRP2Q96PD5 576 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 MRPL45Q9BRJ2 306 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 SNRNP25Q9BV90 132 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 SSU72Q9NP77 194 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 CSADQ9Y600 493 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 NDC80O14777 642 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 CSH1P0DML2 217 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 CSH2P0DML3 217 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PCK1P35558 622 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 TFDP2Q14188 446 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 CRYMQ14894 314 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PLPPR4Q7Z2D5 763 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC26A11Q86WA9 606 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 TTC30AQ86WT1 665 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 NLRP7Q8WX94 980 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 MCUR1Q96AQ8 359 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 KIF12Q96FN5 646 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 SMARCAD1Q9H4L7 1026 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PCDH18Q9HCL0 1135 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 DPP3Q9NY33 737 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 BARX2Q9UMQ3 279 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 TTLL3Q9Y4R7 772 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 LCTP09848 1927 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 APOL1O14791 398 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 NEBLO76041 1014 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 OSBPP22059 807 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 PHKA2P46019 1235 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 GABRB2P47870 512 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 MRPS5P82675 430 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 KCTD2Q14681 263 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 WDR60Q8WVS4 1066 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 SPDL1Q96EA4 605 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 C20orf27Q9GZN8 174 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 DHX35Q9H5Z1 703 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 ETNK2Q9NVF9 386 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 FETUBQ9UGM5 382 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 DOCK1Q14185 1865 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 RGPD3A6NKT7 1758 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 RGPD4Q7Z3J3 1758 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 FCHO1O14526 889 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 GSC2O15499 205 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 LGR5O75473 907 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 CNMDO75829 334 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 KRT36O76013 467 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 C22orf31O95567 290 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 F7P08709 466 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 ESRRAP11474 423 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 GMPRP36959 345 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 BST1Q10588 318 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC10A2Q12908 348 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 CHI3L2Q15782 390 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 C4orf50Q6ZRC1 276 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 NSL1Q96IY1 281 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 BTBD10Q9BSF8 475 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 NT5C1AQ9BXI3 368 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 FRMD8P1Q9BZ68 369 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 POPDC2Q9HBU9 364 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC24A3Q9HC58 644 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 TAS2R1Q9NYW7 299 aa14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-204ENST00000439977 SYNJ2BP-COX16A0A087WUM0 186 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 HBP1O60381 514 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CCDC22O60826 627 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 GABBR2O75899 941 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 ENDOD1O94919 500 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 C1QAP02745 245 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 ENO1P06733 434 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PDGFRBP09619 1106 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 DHRS4L1P0CG22 281 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 SDC4P31431 198 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CDK16Q00536 496 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 KDSRQ06136 332 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 CASC4Q6P4E1 433 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 UNC5AQ6ZN44 842 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 MAP7D3Q8IWC1 876 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 MAB21L3Q8N8X9 362 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PRMT7Q9NVM4 692 aaPredicted RBP14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 COX16Q9P0S2 106 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 PAK5Q9P286 719 aa14.06□□□□□ -0.16
HERPUD1-204ENST00000439977 RBPJLQ9UBG7 517 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms