RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TNRC6BQ9UPQ9 1833 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 FAM221BA6H8Z2 402 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 GIPC1O14908 333 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 CILPO75339 1184 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 BEST1O76090 585 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 SMC2O95347 1197 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 CYP17A1P05093 508 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 TRIM49P0CI25 452 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 CCDC130P13994 396 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 PRCPP42785 496 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 FKBP3Q00688 224 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 IFRD2Q12894 506 aaPredicted RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 SH3PXD2AQ5TCZ1 1133 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 NAIF1Q69YI7 327 aaPredicted RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 KLHDC10Q6PID8 442 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 RHBDF2Q6PJF5 856 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 C12orf29Q8N999 325 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 CYFIP2Q96F07 1278 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
IRF1-204ENST00000439555 SMPD4Q9NXE4 827 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 SCML2Q9UQR0 700 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 LAMA5O15230 3695 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 IGF2RP11717 2491 aa12.12□□□□□ -0.47
IRF1-204ENST00000439555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
IRF1-204ENST00000439555 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 K7EQS6 105 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 SLC16A3O15427 465 aaKnown RBP12.11□□□□□ -0.47
IRF1-204ENST00000439555 APBB3O95704 486 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 CAVIN2O95810 425 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 PSEN1P49768 467 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 MAP3K7CLP57077 242 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 PNOCQ13519 176 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 DMC1Q14565 340 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 ELF2Q15723 593 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 CLEC20AQ6ZU45 233 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 HTR3DQ70Z44 454 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 C11orf74Q86VG3 221 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 PNKPQ96T60 521 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 TMEM9BQ9NQ34 198 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 FAM49BQ9NUQ9 324 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 GMIPQ9P107 970 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 COQ4Q9Y3A0 265 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 SH3BP1Q9Y3L3 701 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 PLXND1Q9Y4D7 1925 aa12.11□□□□□ -0.47
IRF1-204ENST00000439555 OBSL1O75147 1896 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 HOXC11O43248 304 aaPredicted RBP12.1□□□□□ -0.47
IRF1-204ENST00000439555 TLR5O60602 858 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 ADH5P11766 374 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 HOXC13P31276 330 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
IRF1-204ENST00000439555 PPP1R2P41236 205 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 GRIA2P42262 883 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 MXI1P50539 228 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 KIF11P52732 1056 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 GAD2Q05329 585 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
IRF1-204ENST00000439555 ZCCHC14Q8WYQ9 949 aaKnown RBP12.1□□□□□ -0.47
IRF1-204ENST00000439555 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 TSG101Q99816 390 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 DUSP16Q9BY84 665 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 NACA2Q9H009 215 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 SMOC1Q9H4F8 434 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
IRF1-204ENST00000439555 LNP1A1A4G5 178 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CDX4O14627 284 aaPredicted RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 PMM2O15305 246 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 KAT7O95251 611 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 APODP05090 189 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 ADORA2BP29275 332 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 PXNP49023 591 aaPredicted RBP12.09□□□□□ -0.47
IRF1-204ENST00000439555 DGKEP52429 567 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 CREB5Q02930 508 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
IRF1-204ENST00000439555 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms