RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 XYLT2Q9H1B5 865 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 WDR35Q9P2L0 1181 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 CHORDC1Q9UHD1 332 aaPredicted RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 FBXO2Q9UK22 296 aaPredicted RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 PCOLCE2Q9UKZ9 415 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 CYP8B1Q9UNU6 501 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 APOBEC2Q9Y235 224 aaKnown RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 MORC2Q9Y6X9 1032 aaPredicted RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 TNRC6BQ9UPQ9 1833 aaKnown RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 ZNF638Q14966 1978 aaKnown RBP8.37□□□□□ -1.07
LINC00578-201ENST00000439009 BPTFQ12830 3046 aa8.37□□□□□ -1.07
LINC00578-201ENST00000439009 ASXL3Q9C0F0 2248 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 A0A1B0GTW7 788 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PRRT4C9JH25 899 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 CLDN5O00501 218 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 IGLV3-19P01714 112 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 CD6P30203 668 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 ATICP31939 592 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 ZNF132P52740 706 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 GRIK2Q13002 908 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 ENPP2Q13822 863 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PSMD6Q15008 389 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 RABEP1Q15276 862 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 LARP1BQ659C4 914 aaKnown RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 SDE2Q6IQ49 451 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 CHPFQ8IZ52 775 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PNPLA1Q8N8W4 532 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 OR6B3Q8NGW1 331 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 SCAMP5Q8TAC9 235 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 FBXO32Q969P5 355 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 KLF16Q9BXK1 252 aaPredicted RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 DPEP3Q9H4B8 488 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 ITM2CQ9NQX7 267 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PANK4Q9NVE7 773 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 CACNA2D2Q9NY47 1150 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 WSB2Q9NYS7 404 aaPredicted RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 HSPBP1Q9NZL4 362 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 USP36Q9P275 1121 aaKnown RBP8.36□□□□□ -1.07
LINC00578-201ENST00000439009 PCDHGB2Q9Y5G2 931 aa8.36□□□□□ -1.07
LINC00578-201ENST00000439009 A0A087WV48 116 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 METTL12A8MUP2 240 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 A8MXQ7 604 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 NPC1O15118 1278 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 NDUFS2O75306 463 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 TYRP14679 529 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 IDEP14735 1019 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ACO1P21399 889 aaKnown RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 WASP42768 502 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 PGFP49763 221 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 SLC5A3P53794 718 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 SNRPFP62306 86 aaKnown RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 BNC1Q01954 994 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 NFKBIBQ15653 356 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 SNRNP35Q16560 246 aaKnown RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ANO4Q32M45 955 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 KLHDC10Q6PID8 442 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 IL27RAQ6UWB1 636 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 Q6ZNB5 142 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CCDC73Q6ZRK6 1079 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 STXBP4Q6ZWJ1 553 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 EPM2AIP1Q7L775 607 aaPredicted RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ZNF276Q8N554 614 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ZNF507Q8TCN5 953 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ZNF516Q92618 1163 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 XPO6Q96QU8 1125 aaKnown RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CGRRF1Q99675 332 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CDC6Q99741 560 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 BBS2Q9BXC9 721 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CSNK1G1Q9HCP0 422 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 DMAP1Q9NPF5 467 aaPredicted RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CYLDQ9NQC7 956 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 DNAJC17Q9NVM6 304 aaKnown RBP8.35□□□□□ -1.07
LINC00578-201ENST00000439009 GMIPQ9P107 970 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 SLC27A6Q9Y2P4 619 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CLIC4Q9Y696 253 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 ADAMTS20P59510 1910 aa8.35□□□□□ -1.07
LINC00578-201ENST00000439009 CELSR3Q9NYQ7 3312 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 ATP8B3O60423 1300 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 A0A087X0B3 334 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 WASH3PC4AMC7 463 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 NEDD8-MDP1E9PL57 170 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
LINC00578-201ENST00000439009 EIF3DO15371 548 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00578-201ENST00000439009 TGFB1I1O43294 461 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 TLR5O60602 858 aa8.34□□□□□ -1.07
LINC00578-201ENST00000439009 CD2BP2O95400 341 aaKnown RBP8.34□□□□□ -1.07
LINC00578-201ENST00000439009 PTMSP20962 102 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms