RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 CTXN3Q4LDR2 81 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ADAM32Q8TC27 787 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SEPT8Q92599 483 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATXN7L3BQ96GX2 97 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 FRMD8P1Q9BZ68 369 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SLC4A7Q9Y6M7 1214 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SMIM28A0A1B0GU29 152 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 C3orf70A6NLC5 250 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 CHRNB2P17787 502 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PTPN1P18031 435 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SCTRP47872 440 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 C10orf120Q5SQS8 335 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZDHHC17Q8IUH5 632 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM192Q8IY95 271 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZFP42Q96MM3 310 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 RAB3IPQ96QF0 476 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TBCBQ99426 244 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PCYT2Q99447 389 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 KLF6Q99612 283 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ECT2Q9H8V3 914 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM105AQ9NUU6 356 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 DLEC1Q9Y238 1755 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 CAND2O75155 1236 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 GSTA1P08263 222 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 GSTA2P09210 222 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 KITP10721 976 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PAMP19021 973 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ACAP1Q15027 740 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 NFE2Q16621 373 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC36Q1X8D7 754 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ERMARDQ5T6L9 678 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 B3GNT9Q6UX72 402 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 DEFB128Q7Z7B8 93 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ARHGAP24Q8N264 748 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 MCUQ8NE86 351 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 OR6P1Q8NGX9 317 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 IPPQ9Y573 584 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM120BA0PK00 339 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 UNCXA6NJT0 531 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PRRG1O14668 218 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PMM2O15305 246 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 VNN1O95497 513 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 CYP2F1P24903 491 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 TYK2P29597 1187 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PIGZQ86VD9 579 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 MAML1Q92585 1016 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 IFT43Q96FT9 208 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 VPS39Q96JC1 886 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 OSBPL1AQ9BXW6 950 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 PCDH9Q9HC56 1237 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 CRHR2Q13324 411 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF235Q14590 738 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM183BPQ6ZVS7 135 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 B3GALNT2Q8NCR0 500 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM169Q96HH4 297 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 CPXM1Q96SM3 734 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 C10orf88Q9H8K7 445 aa11.99□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM191CA6NGB0 347 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 TTC4O95801 387 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ALDH2P05091 517 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 BDNFP23560 247 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 KDELR1P24390 212 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF792Q3KQV3 632 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 TAF1BQ53T94 588 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 JOSD2Q8TAC2 188 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 BORCS6Q96GS4 357 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 PGLYRP2Q96PD5 576 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 MRPL45Q9BRJ2 306 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ULBP1Q9BZM6 244 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 CABYRO75952 493 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 EDNRBP24530 442 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 RAD23BP54727 409 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 RBBP5Q15291 538 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC38Q5VT99 294 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 XPO6Q96QU8 1125 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 TTC1Q99614 292 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 CATSPERBQ9H7T0 1116 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ASGR1P07306 291 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 PLEKHA7Q6IQ23 1121 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 TFAP2BQ92481 460 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms