RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ACAP3Q96P50 834 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 WDR24Q96S15 920 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 ATP6V0BQ99437 205 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 CRACR2AQ9BSW2 395 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 DNAI2Q9GZS0 605 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 TNMDQ9H2S6 317 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 RWDD1Q9H446 243 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 VPS37BQ9H9H4 285 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 MLXIPQ9HAP2 919 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZNF287Q9HBT7 754 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 ADPRHL2Q9NX46 363 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 IGSF9Q9P2J2 1179 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 MYO1AQ9UBC5 1043 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 LIMCH1Q9UPQ0 1083 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 SPO11Q9Y5K1 396 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 N6AMT1Q9Y5N5 214 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 NR2E3Q9Y5X4 410 aa3.92□□□□□ -1.78
HMGB1P12-201ENST00000438594 GPR75-ASB3A0A0A6YYF3 556 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 RGSL1A5PLK6 1076 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KRT87PA6NCN2 255 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCDC154A6NI56 674 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 H0YC42 278 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 K7EPI3 171 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 UBXN8O00124 270 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 AP3B1O00203 1094 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CACNB4O00305 520 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 PRPSAP2O60256 369 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SYNCRIPO60506 623 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SMPD2O60906 423 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TBX10O75333 385 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 PIAS2O75928 621 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 ITGA5P08648 1049 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 PTPN2P17706 415 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 LAG3P18627 525 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC9A1P19634 815 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 FGFR2P21802 821 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 HSPA1LP34931 641 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KRT2P35908 639 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCT4P50991 539 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC12A3P55017 1021 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 HTRA4P83105 476 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZBTB16Q05516 673 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 DDR1Q08345 913 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 COASYQ13057 564 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CHAF1BQ13112 559 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC12A1Q13621 1099 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KYNUQ16719 465 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KBTBD12Q3ZCT8 623 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 DUSP28Q4G0W2 176 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CEP55Q53EZ4 464 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 MAP3K21Q5TCX8 1036 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TAF3Q5VWG9 929 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC2A7Q6PXP3 512 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 RSPO2Q6UXX9 243 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 LPCAT2Q7L5N7 544 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 THNSL1Q8IYQ7 743 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMCO5AQ8N6Q1 288 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 DRAXINQ8NBI3 349 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 IL31RAQ8NI17 732 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CTCFLQ8NI51 663 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 ETNPPLQ8TBG4 499 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KIAA1524Q8TCG1 905 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KCNG4Q8TDN1 519 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 HSPH1Q92598 858 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TEKT1Q969V4 418 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CALML4Q96GE6 196 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 FEM1CQ96JP0 617 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 MSLNLQ96KJ4 702 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 GDF15Q99988 308 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TCHPQ9BT92 498 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 GPR63Q9BZJ6 419 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TRIM5Q9C035 493 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 QRSL1Q9H0R6 528 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 OR10A2Q9H208 303 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 RNPEPQ9H4A4 650 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 YY1AP1Q9H869 796 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 IPPKQ9H8X2 491 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 ERVMER34-1Q9H9K5 563 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 INCENPQ9NQS7 918 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 EIF2B3Q9NR50 452 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 CHCHD3Q9NX63 227 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 COQ3Q9NZJ6 369 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 C5AR2Q9P296 337 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 EXTL2Q9UBQ6 330 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 UBA2Q9UBT2 640 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZNHIT2Q9UHR6 403 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 OGDHLQ9ULD0 1010 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 SCAF8Q9UPN6 1271 aaKnown RBP3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMEM5Q9Y2B1 443 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 DTNAQ9Y4J8 743 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 AP1M2Q9Y6Q5 423 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 PIAS3Q9Y6X2 628 aa3.91□□□□□ -1.78
HMGB1P12-201ENST00000438594 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 PRAMEF25A6NGN4 478 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 H3BNC9 293 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 M0QX08 132 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 MYO1FO00160 1098 aa3.9□□□□□ -1.79
HMGB1P12-201ENST00000438594 DVL2O14641 736 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 382.1 ms